Protein–RNA interactions for Protein: P29965

CD40LG, CD40 ligand, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40LGP29965 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
CD40LGP29965 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CD40LGP29965 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC14.57□□□□□ -0.08
CD40LGP29965 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CD40LGP29965 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CD40LGP29965 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC14.57□□□□□ -0.08
CD40LGP29965 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CD40LGP29965 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC14.57□□□□□ -0.08
CD40LGP29965 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
CD40LGP29965 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CD40LGP29965 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
CD40LGP29965 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC14.57□□□□□ -0.08
CD40LGP29965 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC14.57□□□□□ -0.08
CD40LGP29965 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC14.57□□□□□ -0.08
CD40LGP29965 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CD40LGP29965 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CD40LGP29965 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CD40LGP29965 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC14.57□□□□□ -0.08
CD40LGP29965 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CD40LGP29965 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CD40LGP29965 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CD40LGP29965 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC14.57□□□□□ -0.08
CD40LGP29965 ECEL1P3-201ENST00000427961 737 ntBASIC14.57□□□□□ -0.08
CD40LGP29965 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC14.57□□□□□ -0.08
CD40LGP29965 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC14.57□□□□□ -0.08
CD40LGP29965 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC14.57□□□□□ -0.08
CD40LGP29965 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC14.57□□□□□ -0.08
CD40LGP29965 POU5F1P6-201ENST00000466990 990 ntBASIC14.57□□□□□ -0.08
CD40LGP29965 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC14.57□□□□□ -0.08
CD40LGP29965 DUX4L17-201ENST00000557360 1267 ntBASIC14.57□□□□□ -0.08
CD40LGP29965 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC14.57□□□□□ -0.08
CD40LGP29965 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC14.57□□□□□ -0.08
CD40LGP29965 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
CD40LGP29965 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
CD40LGP29965 AC092865.7-201ENST00000641832 219 ntBASIC14.57□□□□□ -0.08
CD40LGP29965 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
CD40LGP29965 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CD40LGP29965 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CD40LGP29965 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CD40LGP29965 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
CD40LGP29965 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CD40LGP29965 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CD40LGP29965 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC14.57□□□□□ -0.08
CD40LGP29965 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CD40LGP29965 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CD40LGP29965 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CD40LGP29965 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CD40LGP29965 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC14.57□□□□□ -0.08
CD40LGP29965 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
CD40LGP29965 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC14.57□□□□□ -0.08
CD40LGP29965 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC14.57□□□□□ -0.08
CD40LGP29965 LGALS8-AS1-201ENST00000487567 1457 ntBASIC14.57□□□□□ -0.08
CD40LGP29965 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC14.56□□□□□ -0.08
CD40LGP29965 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC14.56□□□□□ -0.08
CD40LGP29965 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CD40LGP29965 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC14.56□□□□□ -0.08
CD40LGP29965 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
CD40LGP29965 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
CD40LGP29965 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
CD40LGP29965 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CD40LGP29965 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CD40LGP29965 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC14.56□□□□□ -0.08
CD40LGP29965 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC14.56□□□□□ -0.08
CD40LGP29965 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CD40LGP29965 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC14.56□□□□□ -0.08
CD40LGP29965 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC14.56□□□□□ -0.08
CD40LGP29965 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
CD40LGP29965 AL135999.2-201ENST00000622438 1686 ntBASIC14.56□□□□□ -0.08
CD40LGP29965 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CD40LGP29965 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC14.56□□□□□ -0.08
CD40LGP29965 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC14.56□□□□□ -0.08
CD40LGP29965 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
CD40LGP29965 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
CD40LGP29965 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC14.56□□□□□ -0.08
CD40LGP29965 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC14.56□□□□□ -0.08
CD40LGP29965 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CD40LGP29965 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CD40LGP29965 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
CD40LGP29965 AC034232.1-201ENST00000506026 1064 ntBASIC14.56□□□□□ -0.08
CD40LGP29965 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CD40LGP29965 LINC01238-205ENST00000567549 1107 ntBASIC14.56□□□□□ -0.08
CD40LGP29965 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC14.56□□□□□ -0.08
CD40LGP29965 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
CD40LGP29965 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC14.56□□□□□ -0.08
CD40LGP29965 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC14.56□□□□□ -0.08
CD40LGP29965 AC141257.4-201ENST00000634557 245 ntBASIC14.56□□□□□ -0.08
CD40LGP29965 AC136944.6-201ENST00000634818 245 ntBASIC14.56□□□□□ -0.08
CD40LGP29965 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CD40LGP29965 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
CD40LGP29965 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CD40LGP29965 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CD40LGP29965 AC097374.2-201ENST00000618617 1306 ntBASIC14.56□□□□□ -0.08
CD40LGP29965 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC14.56□□□□□ -0.08
CD40LGP29965 GSN-215ENST00000545652 2428 ntTSL 2 BASIC14.56□□□□□ -0.08
CD40LGP29965 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CD40LGP29965 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC14.56□□□□□ -0.08
CD40LGP29965 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
CD40LGP29965 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CD40LGP29965 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
CD40LGP29965 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms