Protein–RNA interactions for Protein: P26374

CHML, Rab proteins geranylgeranyltransferase component A 2, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMLP26374 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CHMLP26374 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC19.7■□□□□ 0.74
CHMLP26374 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CHMLP26374 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
CHMLP26374 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC19.7■□□□□ 0.74
CHMLP26374 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CHMLP26374 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
CHMLP26374 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
CHMLP26374 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC19.7■□□□□ 0.74
CHMLP26374 HLA-DQB2-231ENST00000435145 2026 ntBASIC19.69■□□□□ 0.74
CHMLP26374 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CHMLP26374 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CHMLP26374 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC19.69■□□□□ 0.74
CHMLP26374 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CHMLP26374 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CHMLP26374 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CHMLP26374 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CHMLP26374 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
CHMLP26374 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC19.69■□□□□ 0.74
CHMLP26374 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CHMLP26374 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CHMLP26374 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC19.69■□□□□ 0.74
CHMLP26374 AC004832.2-201ENST00000426397 482 ntBASIC19.69■□□□□ 0.74
CHMLP26374 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC19.69■□□□□ 0.74
CHMLP26374 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC19.69■□□□□ 0.74
CHMLP26374 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC19.69■□□□□ 0.74
CHMLP26374 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC19.69■□□□□ 0.74
CHMLP26374 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC19.69■□□□□ 0.74
CHMLP26374 MIR4321-201ENST00000592276 80 ntBASIC19.69■□□□□ 0.74
CHMLP26374 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC19.69■□□□□ 0.74
CHMLP26374 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CHMLP26374 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CHMLP26374 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
CHMLP26374 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CHMLP26374 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CHMLP26374 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CHMLP26374 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CHMLP26374 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CHMLP26374 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC19.68■□□□□ 0.74
CHMLP26374 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CHMLP26374 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC19.68■□□□□ 0.74
CHMLP26374 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CHMLP26374 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
CHMLP26374 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CHMLP26374 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC19.68■□□□□ 0.74
CHMLP26374 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC19.68■□□□□ 0.74
CHMLP26374 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
CHMLP26374 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC19.68■□□□□ 0.74
CHMLP26374 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CHMLP26374 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CHMLP26374 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
CHMLP26374 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CHMLP26374 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CHMLP26374 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CHMLP26374 NEK7-201ENST00000367383 586 ntTSL 2 BASIC19.68■□□□□ 0.74
CHMLP26374 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CHMLP26374 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CHMLP26374 PMP22-202ENST00000395936 816 ntTSL 3 BASIC19.68■□□□□ 0.74
CHMLP26374 FABP5-202ENST00000396359 986 ntTSL 5 BASIC19.68■□□□□ 0.74
CHMLP26374 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC19.68■□□□□ 0.74
CHMLP26374 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC19.68■□□□□ 0.74
CHMLP26374 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CHMLP26374 AC027307.2-201ENST00000591252 911 ntBASIC19.68■□□□□ 0.74
CHMLP26374 CITED2-204ENST00000618718 901 ntTSL 2 BASIC19.68■□□□□ 0.74
CHMLP26374 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CHMLP26374 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
CHMLP26374 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CHMLP26374 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC19.68■□□□□ 0.74
CHMLP26374 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CHMLP26374 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CHMLP26374 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
CHMLP26374 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CHMLP26374 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CHMLP26374 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC19.68■□□□□ 0.74
CHMLP26374 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CHMLP26374 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CHMLP26374 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CHMLP26374 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC19.67■□□□□ 0.74
CHMLP26374 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CHMLP26374 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CHMLP26374 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CHMLP26374 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CHMLP26374 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC19.67■□□□□ 0.74
CHMLP26374 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
CHMLP26374 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
CHMLP26374 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
CHMLP26374 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CHMLP26374 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
CHMLP26374 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CHMLP26374 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CHMLP26374 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
CHMLP26374 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
CHMLP26374 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CHMLP26374 HAUS4P1-201ENST00000406739 1145 ntBASIC19.67■□□□□ 0.74
CHMLP26374 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
CHMLP26374 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CHMLP26374 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC19.67■□□□□ 0.74
CHMLP26374 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC19.67■□□□□ 0.74
CHMLP26374 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC19.67■□□□□ 0.74
CHMLP26374 AC245100.5-201ENST00000452108 331 ntBASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms