Protein–RNA interactions for Protein: P20700

LMNB1, Lamin-B1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1P20700 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC19.66■□□□□ 0.74
LMNB1P20700 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC19.66■□□□□ 0.74
LMNB1P20700 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
LMNB1P20700 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
LMNB1P20700 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC19.66■□□□□ 0.74
LMNB1P20700 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC19.66■□□□□ 0.74
LMNB1P20700 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
LMNB1P20700 AC079328.1-201ENST00000560358 952 ntBASIC19.66■□□□□ 0.74
LMNB1P20700 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC19.66■□□□□ 0.74
LMNB1P20700 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC19.66■□□□□ 0.74
LMNB1P20700 LINC01115-203ENST00000606068 577 ntBASIC19.66■□□□□ 0.74
LMNB1P20700 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC19.66■□□□□ 0.74
LMNB1P20700 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC19.66■□□□□ 0.74
LMNB1P20700 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC19.66■□□□□ 0.74
LMNB1P20700 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
LMNB1P20700 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LMNB1P20700 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LMNB1P20700 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
LMNB1P20700 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LMNB1P20700 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
LMNB1P20700 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LMNB1P20700 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LMNB1P20700 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LMNB1P20700 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LMNB1P20700 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
LMNB1P20700 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LMNB1P20700 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LMNB1P20700 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
LMNB1P20700 MIR663B-201ENST00000408361 115 ntBASIC19.65■□□□□ 0.74
LMNB1P20700 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LMNB1P20700 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
LMNB1P20700 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LMNB1P20700 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC19.65■□□□□ 0.74
LMNB1P20700 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
LMNB1P20700 AC067852.2-201ENST00000590513 2313 ntBASIC19.65■□□□□ 0.74
LMNB1P20700 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
LMNB1P20700 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC19.65■□□□□ 0.74
LMNB1P20700 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LMNB1P20700 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LMNB1P20700 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC19.65■□□□□ 0.74
LMNB1P20700 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LMNB1P20700 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
LMNB1P20700 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
LMNB1P20700 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
LMNB1P20700 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC19.64■□□□□ 0.73
LMNB1P20700 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LMNB1P20700 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
LMNB1P20700 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LMNB1P20700 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LMNB1P20700 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
LMNB1P20700 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC19.64■□□□□ 0.73
LMNB1P20700 FAM86LP-201ENST00000478302 853 ntBASIC19.64■□□□□ 0.73
LMNB1P20700 FAM86HP-204ENST00000513466 959 ntBASIC19.64■□□□□ 0.73
LMNB1P20700 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
LMNB1P20700 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
LMNB1P20700 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC19.64■□□□□ 0.73
LMNB1P20700 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC19.64■□□□□ 0.73
LMNB1P20700 RHOXF1P1-202ENST00000635473 501 ntBASIC19.64■□□□□ 0.73
LMNB1P20700 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC19.64■□□□□ 0.73
LMNB1P20700 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
LMNB1P20700 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
LMNB1P20700 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LMNB1P20700 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC19.64■□□□□ 0.73
LMNB1P20700 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC19.64■□□□□ 0.73
LMNB1P20700 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC19.64■□□□□ 0.73
LMNB1P20700 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
LMNB1P20700 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LMNB1P20700 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LMNB1P20700 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
LMNB1P20700 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LMNB1P20700 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
LMNB1P20700 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LMNB1P20700 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC19.63■□□□□ 0.73
LMNB1P20700 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LMNB1P20700 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
LMNB1P20700 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
LMNB1P20700 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC19.63■□□□□ 0.73
LMNB1P20700 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC19.63■□□□□ 0.73
LMNB1P20700 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
LMNB1P20700 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
LMNB1P20700 ARTN-209ENST00000479128 471 ntTSL 3 BASIC19.63■□□□□ 0.73
LMNB1P20700 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC19.63■□□□□ 0.73
LMNB1P20700 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC19.63■□□□□ 0.73
LMNB1P20700 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC19.63■□□□□ 0.73
LMNB1P20700 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC19.63■□□□□ 0.73
LMNB1P20700 AC124947.2-201ENST00000547118 1133 ntBASIC19.63■□□□□ 0.73
LMNB1P20700 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
LMNB1P20700 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC19.63■□□□□ 0.73
LMNB1P20700 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC19.63■□□□□ 0.73
LMNB1P20700 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
LMNB1P20700 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC19.63■□□□□ 0.73
LMNB1P20700 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC19.63■□□□□ 0.73
LMNB1P20700 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC19.63■□□□□ 0.73
LMNB1P20700 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
LMNB1P20700 ABBA01031663.1-201ENST00000635630 790 ntBASIC19.63■□□□□ 0.73
LMNB1P20700 AC008687.7-202ENST00000637404 953 ntBASIC19.63■□□□□ 0.73
LMNB1P20700 HADH-212ENST00000638621 741 ntTSL 5 BASIC19.63■□□□□ 0.73
LMNB1P20700 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
LMNB1P20700 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
LMNB1P20700 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 73 ms