Protein–RNA interactions for Protein: P11441

UBL4A, Ubiquitin-like protein 4A, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4AP11441 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC15.21■□□□□ 0.03
UBL4AP11441 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC15.21■□□□□ 0.03
UBL4AP11441 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
UBL4AP11441 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC15.21■□□□□ 0.03
UBL4AP11441 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
UBL4AP11441 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
UBL4AP11441 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC15.21■□□□□ 0.03
UBL4AP11441 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC15.21■□□□□ 0.03
UBL4AP11441 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
UBL4AP11441 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
UBL4AP11441 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
UBL4AP11441 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC15.21■□□□□ 0.03
UBL4AP11441 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
UBL4AP11441 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
UBL4AP11441 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC15.21■□□□□ 0.03
UBL4AP11441 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
UBL4AP11441 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.03
UBL4AP11441 DPM2-202ENST00000373110 738 ntTSL 2 BASIC15.21■□□□□ 0.03
UBL4AP11441 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
UBL4AP11441 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
UBL4AP11441 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
UBL4AP11441 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
UBL4AP11441 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC15.21■□□□□ 0.03
UBL4AP11441 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC15.21■□□□□ 0.03
UBL4AP11441 KRT18P2-201ENST00000447938 1258 ntBASIC15.21■□□□□ 0.03
UBL4AP11441 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
UBL4AP11441 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC15.21■□□□□ 0.03
UBL4AP11441 NMU-203ENST00000507338 658 ntTSL 3 BASIC15.21■□□□□ 0.03
UBL4AP11441 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC15.21■□□□□ 0.03
UBL4AP11441 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
UBL4AP11441 KRT19P2-202ENST00000557173 1012 ntBASIC15.21■□□□□ 0.03
UBL4AP11441 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC15.21■□□□□ 0.03
UBL4AP11441 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC15.21■□□□□ 0.03
UBL4AP11441 FAM197Y3-203ENST00000618346 717 ntBASIC15.21■□□□□ 0.03
UBL4AP11441 NME4-212ENST00000621774 904 ntTSL 3 BASIC15.21■□□□□ 0.03
UBL4AP11441 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC15.21■□□□□ 0.03
UBL4AP11441 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
UBL4AP11441 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
UBL4AP11441 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC15.21■□□□□ 0.03
UBL4AP11441 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC15.21■□□□□ 0.03
UBL4AP11441 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
UBL4AP11441 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
UBL4AP11441 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
UBL4AP11441 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC15.21■□□□□ 0.03
UBL4AP11441 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC15.21■□□□□ 0.03
UBL4AP11441 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
UBL4AP11441 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC15.21■□□□□ 0.03
UBL4AP11441 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
UBL4AP11441 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
UBL4AP11441 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC15.21■□□□□ 0.02
UBL4AP11441 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
UBL4AP11441 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC15.21■□□□□ 0.02
UBL4AP11441 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.02
UBL4AP11441 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
UBL4AP11441 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
UBL4AP11441 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
UBL4AP11441 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
UBL4AP11441 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
UBL4AP11441 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
UBL4AP11441 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
UBL4AP11441 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC15.2■□□□□ 0.02
UBL4AP11441 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
UBL4AP11441 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
UBL4AP11441 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
UBL4AP11441 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
UBL4AP11441 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
UBL4AP11441 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
UBL4AP11441 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC15.2■□□□□ 0.02
UBL4AP11441 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
UBL4AP11441 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
UBL4AP11441 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC15.2■□□□□ 0.02
UBL4AP11441 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
UBL4AP11441 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
UBL4AP11441 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC15.2■□□□□ 0.02
UBL4AP11441 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
UBL4AP11441 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
UBL4AP11441 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
UBL4AP11441 CD99-202ENST00000381180 530 ntTSL 2 BASIC15.2■□□□□ 0.02
UBL4AP11441 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
UBL4AP11441 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC15.2■□□□□ 0.02
UBL4AP11441 FIS1-203ENST00000442303 631 ntTSL 3 BASIC15.2■□□□□ 0.02
UBL4AP11441 KRT18P3-201ENST00000451602 1288 ntBASIC15.2■□□□□ 0.02
UBL4AP11441 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC15.2■□□□□ 0.02
UBL4AP11441 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC15.2■□□□□ 0.02
UBL4AP11441 SMN2-210ENST00000511812 867 ntTSL 2 BASIC15.2■□□□□ 0.02
UBL4AP11441 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC15.2■□□□□ 0.02
UBL4AP11441 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
UBL4AP11441 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC15.2■□□□□ 0.02
UBL4AP11441 THTPA-204ENST00000554970 569 ntTSL 4 BASIC15.2■□□□□ 0.02
UBL4AP11441 THTPA-206ENST00000556015 535 ntTSL 3 BASIC15.2■□□□□ 0.02
UBL4AP11441 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC15.2■□□□□ 0.02
UBL4AP11441 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC15.2■□□□□ 0.02
UBL4AP11441 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
UBL4AP11441 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
UBL4AP11441 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
UBL4AP11441 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
UBL4AP11441 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
UBL4AP11441 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
UBL4AP11441 USP31-203ENST00000567975 2142 ntTSL 2 BASIC15.2■□□□□ 0.02
UBL4AP11441 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 73.6 ms