Protein–RNA interactions for Protein: P0C875

FAM228B, Protein FAM228B, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228BP0C875 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
FAM228BP0C875 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC17.46■□□□□ 0.39
FAM228BP0C875 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
FAM228BP0C875 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
FAM228BP0C875 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
FAM228BP0C875 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC17.46■□□□□ 0.39
FAM228BP0C875 AC093724.1-201ENST00000448659 1027 ntBASIC17.46■□□□□ 0.39
FAM228BP0C875 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC17.46■□□□□ 0.39
FAM228BP0C875 RNA5SP419-201ENST00000515908 135 ntBASIC17.46■□□□□ 0.39
FAM228BP0C875 AP002469.2-201ENST00000531724 424 ntBASIC17.46■□□□□ 0.39
FAM228BP0C875 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC17.46■□□□□ 0.39
FAM228BP0C875 PRKN-208ENST00000610470 531 ntTSL 2 BASIC17.46■□□□□ 0.39
FAM228BP0C875 PRKN-209ENST00000612485 225 ntTSL 5 BASIC17.46■□□□□ 0.39
FAM228BP0C875 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC17.46■□□□□ 0.39
FAM228BP0C875 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
FAM228BP0C875 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC17.46■□□□□ 0.39
FAM228BP0C875 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
FAM228BP0C875 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
FAM228BP0C875 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
FAM228BP0C875 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC17.46■□□□□ 0.39
FAM228BP0C875 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
FAM228BP0C875 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.38
FAM228BP0C875 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.38
FAM228BP0C875 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC17.46■□□□□ 0.38
FAM228BP0C875 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC17.46■□□□□ 0.38
FAM228BP0C875 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC17.46■□□□□ 0.38
FAM228BP0C875 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC17.46■□□□□ 0.38
FAM228BP0C875 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC17.46■□□□□ 0.38
FAM228BP0C875 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
FAM228BP0C875 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
FAM228BP0C875 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
FAM228BP0C875 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
FAM228BP0C875 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
FAM228BP0C875 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
FAM228BP0C875 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC17.45■□□□□ 0.38
FAM228BP0C875 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
FAM228BP0C875 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
FAM228BP0C875 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC17.45■□□□□ 0.38
FAM228BP0C875 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC17.45■□□□□ 0.38
FAM228BP0C875 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
FAM228BP0C875 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
FAM228BP0C875 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
FAM228BP0C875 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC17.45■□□□□ 0.38
FAM228BP0C875 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC17.45■□□□□ 0.38
FAM228BP0C875 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
FAM228BP0C875 HCG4B-203ENST00000450128 991 ntBASIC17.45■□□□□ 0.38
FAM228BP0C875 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC17.45■□□□□ 0.38
FAM228BP0C875 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC17.45■□□□□ 0.38
FAM228BP0C875 TCAP-202ENST00000578283 583 ntTSL 5 BASIC17.45■□□□□ 0.38
FAM228BP0C875 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC17.45■□□□□ 0.38
FAM228BP0C875 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
FAM228BP0C875 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC17.45■□□□□ 0.38
FAM228BP0C875 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
FAM228BP0C875 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
FAM228BP0C875 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
FAM228BP0C875 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
FAM228BP0C875 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC17.45■□□□□ 0.38
FAM228BP0C875 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
FAM228BP0C875 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC17.45■□□□□ 0.38
FAM228BP0C875 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
FAM228BP0C875 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
FAM228BP0C875 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
FAM228BP0C875 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
FAM228BP0C875 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
FAM228BP0C875 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC17.44■□□□□ 0.38
FAM228BP0C875 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
FAM228BP0C875 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
FAM228BP0C875 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
FAM228BP0C875 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
FAM228BP0C875 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
FAM228BP0C875 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
FAM228BP0C875 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
FAM228BP0C875 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
FAM228BP0C875 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
FAM228BP0C875 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC17.44■□□□□ 0.38
FAM228BP0C875 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
FAM228BP0C875 MRPL3P1-201ENST00000400109 1033 ntBASIC17.44■□□□□ 0.38
FAM228BP0C875 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
FAM228BP0C875 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
FAM228BP0C875 AC010507.1-201ENST00000633895 436 ntBASIC17.44■□□□□ 0.38
FAM228BP0C875 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC17.44■□□□□ 0.38
FAM228BP0C875 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
FAM228BP0C875 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
FAM228BP0C875 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
FAM228BP0C875 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
FAM228BP0C875 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
FAM228BP0C875 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
FAM228BP0C875 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
FAM228BP0C875 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
FAM228BP0C875 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC17.44■□□□□ 0.38
FAM228BP0C875 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
FAM228BP0C875 AMT-233ENST00000636522 1620 ntTSL 2 BASIC17.43■□□□□ 0.38
FAM228BP0C875 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
FAM228BP0C875 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC17.43■□□□□ 0.38
FAM228BP0C875 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
FAM228BP0C875 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC17.43■□□□□ 0.38
FAM228BP0C875 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC17.43■□□□□ 0.38
FAM228BP0C875 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
FAM228BP0C875 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
FAM228BP0C875 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms