Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PDGFAP04085 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
PDGFAP04085 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PDGFAP04085 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PDGFAP04085 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC15.38■□□□□ 0.05
PDGFAP04085 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
PDGFAP04085 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PDGFAP04085 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC15.37■□□□□ 0.05
PDGFAP04085 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
PDGFAP04085 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
PDGFAP04085 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PDGFAP04085 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC15.37■□□□□ 0.05
PDGFAP04085 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC15.37■□□□□ 0.05
PDGFAP04085 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC15.37■□□□□ 0.05
PDGFAP04085 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC15.37■□□□□ 0.05
PDGFAP04085 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
PDGFAP04085 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
PDGFAP04085 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
PDGFAP04085 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC15.37■□□□□ 0.05
PDGFAP04085 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PDGFAP04085 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PDGFAP04085 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PDGFAP04085 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
PDGFAP04085 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
PDGFAP04085 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
PDGFAP04085 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PDGFAP04085 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
PDGFAP04085 PIN1P1-201ENST00000412108 996 ntBASIC15.37■□□□□ 0.05
PDGFAP04085 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
PDGFAP04085 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC15.37■□□□□ 0.05
PDGFAP04085 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC15.37■□□□□ 0.05
PDGFAP04085 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
PDGFAP04085 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
PDGFAP04085 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC15.37■□□□□ 0.05
PDGFAP04085 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC15.37■□□□□ 0.05
PDGFAP04085 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC15.37■□□□□ 0.05
PDGFAP04085 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC15.37■□□□□ 0.05
PDGFAP04085 NKG7-205ENST00000600427 520 ntTSL 3 BASIC15.37■□□□□ 0.05
PDGFAP04085 SPDYE12P-201ENST00000618416 771 ntBASIC15.37■□□□□ 0.05
PDGFAP04085 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC15.37■□□□□ 0.05
PDGFAP04085 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PDGFAP04085 AL662844.4-201ENST00000606367 2838 ntBASIC15.37■□□□□ 0.05
PDGFAP04085 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PDGFAP04085 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
PDGFAP04085 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
PDGFAP04085 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
PDGFAP04085 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
PDGFAP04085 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PDGFAP04085 BID-213ENST00000615414 2236 ntTSL 5 BASIC15.36■□□□□ 0.05
PDGFAP04085 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
PDGFAP04085 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PDGFAP04085 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
PDGFAP04085 AL023806.1-201ENST00000603994 1649 ntBASIC15.36■□□□□ 0.05
PDGFAP04085 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC15.36■□□□□ 0.05
PDGFAP04085 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
PDGFAP04085 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
PDGFAP04085 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PDGFAP04085 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC15.36■□□□□ 0.05
PDGFAP04085 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC15.36■□□□□ 0.05
PDGFAP04085 OR8S1-201ENST00000310194 1080 ntBASIC15.36■□□□□ 0.05
PDGFAP04085 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC15.36■□□□□ 0.05
PDGFAP04085 COX5BP8-201ENST00000416911 349 ntBASIC15.36■□□□□ 0.05
PDGFAP04085 NME2P1-201ENST00000426182 414 ntBASIC15.36■□□□□ 0.05
PDGFAP04085 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC15.36■□□□□ 0.05
PDGFAP04085 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC15.36■□□□□ 0.05
PDGFAP04085 TMPRSS11CP-201ENST00000453277 683 ntBASIC15.36■□□□□ 0.05
PDGFAP04085 RN7SL692P-201ENST00000464677 288 ntBASIC15.36■□□□□ 0.05
PDGFAP04085 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC15.36■□□□□ 0.05
PDGFAP04085 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
PDGFAP04085 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
PDGFAP04085 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC15.36■□□□□ 0.05
PDGFAP04085 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC15.36■□□□□ 0.05
PDGFAP04085 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
PDGFAP04085 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC15.36■□□□□ 0.05
PDGFAP04085 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC15.36■□□□□ 0.05
PDGFAP04085 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC15.36■□□□□ 0.05
PDGFAP04085 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PDGFAP04085 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PDGFAP04085 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC15.36■□□□□ 0.05
PDGFAP04085 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
PDGFAP04085 MYB-201ENST00000316528 3571 ntTSL 5 BASIC15.36■□□□□ 0.05
PDGFAP04085 MYB-241ENST00000616088 3573 ntTSL 5 BASIC15.36■□□□□ 0.05
PDGFAP04085 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PDGFAP04085 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC15.36■□□□□ 0.05
PDGFAP04085 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PDGFAP04085 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PDGFAP04085 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
PDGFAP04085 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
PDGFAP04085 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
PDGFAP04085 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
PDGFAP04085 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC15.35■□□□□ 0.05
PDGFAP04085 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
PDGFAP04085 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC15.35■□□□□ 0.05
PDGFAP04085 AL355312.1-201ENST00000407115 2176 ntBASIC15.35■□□□□ 0.05
PDGFAP04085 CES3-203ENST00000543856 3178 ntTSL 2 BASIC15.35■□□□□ 0.05
PDGFAP04085 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PDGFAP04085 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
PDGFAP04085 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PDGFAP04085 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PDGFAP04085 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms