Protein–RNA interactions for Protein: P04035

HMGCR, 3-hydroxy-3-methylglutaryl-coenzyme A reductase, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCRP04035 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
HMGCRP04035 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
HMGCRP04035 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HMGCRP04035 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
HMGCRP04035 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
HMGCRP04035 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HMGCRP04035 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
HMGCRP04035 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC18.33■□□□□ 0.53
HMGCRP04035 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.53
HMGCRP04035 AC020907.1-201ENST00000616460 1350 ntBASIC18.33■□□□□ 0.53
HMGCRP04035 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
HMGCRP04035 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
HMGCRP04035 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC18.33■□□□□ 0.53
HMGCRP04035 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC18.33■□□□□ 0.53
HMGCRP04035 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
HMGCRP04035 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
HMGCRP04035 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
HMGCRP04035 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC18.33■□□□□ 0.53
HMGCRP04035 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC18.33■□□□□ 0.52
HMGCRP04035 LBX2-201ENST00000341396 886 ntTSL 3 BASIC18.33■□□□□ 0.52
HMGCRP04035 HAUS4P1-201ENST00000406739 1145 ntBASIC18.33■□□□□ 0.52
HMGCRP04035 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC18.33■□□□□ 0.52
HMGCRP04035 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC18.33■□□□□ 0.52
HMGCRP04035 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC18.33■□□□□ 0.52
HMGCRP04035 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC18.33■□□□□ 0.52
HMGCRP04035 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC18.33■□□□□ 0.52
HMGCRP04035 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
HMGCRP04035 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC18.33■□□□□ 0.52
HMGCRP04035 AC020765.3-201ENST00000613051 740 ntBASIC18.33■□□□□ 0.52
HMGCRP04035 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC18.33■□□□□ 0.52
HMGCRP04035 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
HMGCRP04035 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC18.33■□□□□ 0.52
HMGCRP04035 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC18.33■□□□□ 0.52
HMGCRP04035 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
HMGCRP04035 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
HMGCRP04035 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
HMGCRP04035 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
HMGCRP04035 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
HMGCRP04035 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
HMGCRP04035 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
HMGCRP04035 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
HMGCRP04035 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
HMGCRP04035 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
HMGCRP04035 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
HMGCRP04035 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
HMGCRP04035 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
HMGCRP04035 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC18.32■□□□□ 0.52
HMGCRP04035 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
HMGCRP04035 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC18.32■□□□□ 0.52
HMGCRP04035 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
HMGCRP04035 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC18.32■□□□□ 0.52
HMGCRP04035 AC093525.8-201ENST00000624099 1342 ntBASIC18.32■□□□□ 0.52
HMGCRP04035 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
HMGCRP04035 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
HMGCRP04035 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HMGCRP04035 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HMGCRP04035 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
HMGCRP04035 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
HMGCRP04035 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
HMGCRP04035 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HMGCRP04035 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
HMGCRP04035 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HMGCRP04035 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HMGCRP04035 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC18.32■□□□□ 0.52
HMGCRP04035 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC18.32■□□□□ 0.52
HMGCRP04035 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC18.32■□□□□ 0.52
HMGCRP04035 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC18.32■□□□□ 0.52
HMGCRP04035 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC18.32■□□□□ 0.52
HMGCRP04035 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC18.32■□□□□ 0.52
HMGCRP04035 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
HMGCRP04035 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
HMGCRP04035 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
HMGCRP04035 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
HMGCRP04035 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC18.32■□□□□ 0.52
HMGCRP04035 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
HMGCRP04035 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC18.32■□□□□ 0.52
HMGCRP04035 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
HMGCRP04035 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
HMGCRP04035 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
HMGCRP04035 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
HMGCRP04035 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
HMGCRP04035 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
HMGCRP04035 RHBDF1P1-201ENST00000427504 1941 ntBASIC18.31■□□□□ 0.52
HMGCRP04035 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HMGCRP04035 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC18.31■□□□□ 0.52
HMGCRP04035 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
HMGCRP04035 HR-201ENST00000312841 5351 ntTSL 5 BASIC18.31■□□□□ 0.52
HMGCRP04035 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
HMGCRP04035 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
HMGCRP04035 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC18.31■□□□□ 0.52
HMGCRP04035 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
HMGCRP04035 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC18.31■□□□□ 0.52
HMGCRP04035 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
HMGCRP04035 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC18.31■□□□□ 0.52
HMGCRP04035 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
HMGCRP04035 BRWD1P1-201ENST00000401091 371 ntBASIC18.31■□□□□ 0.52
HMGCRP04035 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC18.31■□□□□ 0.52
HMGCRP04035 PTK7-212ENST00000476760 902 ntTSL 2 BASIC18.31■□□□□ 0.52
HMGCRP04035 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
HMGCRP04035 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms