Protein–RNA interactions for Protein: O75346

ZNF253, Zinc finger protein 253, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF253O75346 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ZNF253O75346 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
ZNF253O75346 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
ZNF253O75346 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ZNF253O75346 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
ZNF253O75346 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
ZNF253O75346 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC12.84□□□□□ -0.35
ZNF253O75346 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC12.84□□□□□ -0.35
ZNF253O75346 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ZNF253O75346 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
ZNF253O75346 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ZNF253O75346 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ZNF253O75346 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC12.84□□□□□ -0.35
ZNF253O75346 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
ZNF253O75346 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC12.84□□□□□ -0.35
ZNF253O75346 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
ZNF253O75346 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
ZNF253O75346 AC079776.2-201ENST00000641154 1609 ntBASIC12.84□□□□□ -0.35
ZNF253O75346 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC12.84□□□□□ -0.35
ZNF253O75346 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC12.84□□□□□ -0.35
ZNF253O75346 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC12.84□□□□□ -0.35
ZNF253O75346 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
ZNF253O75346 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
ZNF253O75346 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC12.83□□□□□ -0.35
ZNF253O75346 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.35
ZNF253O75346 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
ZNF253O75346 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
ZNF253O75346 AC002310.6-201ENST00000624451 1377 ntBASIC12.83□□□□□ -0.36
ZNF253O75346 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
ZNF253O75346 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
ZNF253O75346 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC12.83□□□□□ -0.36
ZNF253O75346 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
ZNF253O75346 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
ZNF253O75346 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
ZNF253O75346 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
ZNF253O75346 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC12.83□□□□□ -0.36
ZNF253O75346 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
ZNF253O75346 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
ZNF253O75346 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
ZNF253O75346 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
ZNF253O75346 FUOM-202ENST00000368551 628 ntTSL 3 BASIC12.83□□□□□ -0.36
ZNF253O75346 FXN-203ENST00000396366 922 ntTSL 2 BASIC12.83□□□□□ -0.36
ZNF253O75346 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
ZNF253O75346 ABCD1P5-201ENST00000445663 754 ntBASIC12.83□□□□□ -0.36
ZNF253O75346 PRYP5-201ENST00000451909 266 ntBASIC12.83□□□□□ -0.36
ZNF253O75346 TOB2P1-201ENST00000469761 992 ntBASIC12.83□□□□□ -0.36
ZNF253O75346 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC12.83□□□□□ -0.36
ZNF253O75346 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC12.83□□□□□ -0.36
ZNF253O75346 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC12.83□□□□□ -0.36
ZNF253O75346 RN7SL850P-201ENST00000579959 291 ntBASIC12.83□□□□□ -0.36
ZNF253O75346 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
ZNF253O75346 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
ZNF253O75346 AC092329.2-201ENST00000598402 547 ntBASIC12.83□□□□□ -0.36
ZNF253O75346 TERC-201ENST00000602385 541 ntBASIC12.83□□□□□ -0.36
ZNF253O75346 AC116407.4-201ENST00000623319 1061 ntBASIC12.83□□□□□ -0.36
ZNF253O75346 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
ZNF253O75346 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
ZNF253O75346 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
ZNF253O75346 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
ZNF253O75346 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
ZNF253O75346 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC12.83□□□□□ -0.36
ZNF253O75346 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC12.83□□□□□ -0.36
ZNF253O75346 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
ZNF253O75346 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
ZNF253O75346 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
ZNF253O75346 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
ZNF253O75346 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
ZNF253O75346 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
ZNF253O75346 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
ZNF253O75346 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
ZNF253O75346 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
ZNF253O75346 AC073347.1-201ENST00000421633 2643 ntBASIC12.83□□□□□ -0.36
ZNF253O75346 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC12.83□□□□□ -0.36
ZNF253O75346 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
ZNF253O75346 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
ZNF253O75346 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC12.83□□□□□ -0.36
ZNF253O75346 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
ZNF253O75346 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
ZNF253O75346 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC12.83□□□□□ -0.36
ZNF253O75346 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
ZNF253O75346 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
ZNF253O75346 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
ZNF253O75346 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
ZNF253O75346 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC12.83□□□□□ -0.36
ZNF253O75346 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
ZNF253O75346 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
ZNF253O75346 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
ZNF253O75346 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC12.83□□□□□ -0.36
ZNF253O75346 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC12.83□□□□□ -0.36
ZNF253O75346 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
ZNF253O75346 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC12.83□□□□□ -0.36
ZNF253O75346 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ZNF253O75346 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
ZNF253O75346 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
ZNF253O75346 AC104581.4-201ENST00000623126 3052 ntBASIC12.82□□□□□ -0.36
ZNF253O75346 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
ZNF253O75346 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
ZNF253O75346 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC12.82□□□□□ -0.36
ZNF253O75346 PC-204ENST00000524491 1714 ntTSL 2 BASIC12.82□□□□□ -0.36
ZNF253O75346 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC12.82□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 70.9 ms