Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 AC107890.1-201ENST00000422478 521 ntBASIC15.78■□□□□ 0.12
CPNE3O75131 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC15.78■□□□□ 0.12
CPNE3O75131 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC15.78■□□□□ 0.12
CPNE3O75131 SPDYE14P-201ENST00000442619 822 ntBASIC15.78■□□□□ 0.12
CPNE3O75131 BCRP1-201ENST00000444246 691 ntBASIC15.78■□□□□ 0.12
CPNE3O75131 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC15.78■□□□□ 0.12
CPNE3O75131 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CPNE3O75131 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC15.78■□□□□ 0.12
CPNE3O75131 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC15.78■□□□□ 0.12
CPNE3O75131 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
CPNE3O75131 SIGLEC29P-201ENST00000599873 1114 ntBASIC15.78■□□□□ 0.12
CPNE3O75131 AL096865.1-201ENST00000606796 927 ntBASIC15.78■□□□□ 0.12
CPNE3O75131 RAB34-224ENST00000636513 888 ntTSL 5 BASIC15.78■□□□□ 0.12
CPNE3O75131 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC15.78■□□□□ 0.12
CPNE3O75131 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
CPNE3O75131 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC15.78■□□□□ 0.12
CPNE3O75131 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
CPNE3O75131 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
CPNE3O75131 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CPNE3O75131 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CPNE3O75131 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC15.78■□□□□ 0.12
CPNE3O75131 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CPNE3O75131 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CPNE3O75131 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC15.78■□□□□ 0.12
CPNE3O75131 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CPNE3O75131 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
CPNE3O75131 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC15.78■□□□□ 0.12
CPNE3O75131 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CPNE3O75131 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CPNE3O75131 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CPNE3O75131 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
CPNE3O75131 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC15.77■□□□□ 0.12
CPNE3O75131 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
CPNE3O75131 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC15.77■□□□□ 0.12
CPNE3O75131 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CPNE3O75131 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
CPNE3O75131 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CPNE3O75131 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
CPNE3O75131 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CPNE3O75131 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
CPNE3O75131 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CPNE3O75131 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CPNE3O75131 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC15.77■□□□□ 0.12
CPNE3O75131 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CPNE3O75131 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CPNE3O75131 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CPNE3O75131 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
CPNE3O75131 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
CPNE3O75131 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
CPNE3O75131 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC15.77■□□□□ 0.12
CPNE3O75131 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CPNE3O75131 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
CPNE3O75131 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CPNE3O75131 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CPNE3O75131 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CPNE3O75131 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
CPNE3O75131 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC15.77■□□□□ 0.12
CPNE3O75131 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC15.77■□□□□ 0.12
CPNE3O75131 RNA5SP421-201ENST00000516864 134 ntBASIC15.77■□□□□ 0.12
CPNE3O75131 GATD1-206ENST00000526325 756 ntTSL 5 BASIC15.77■□□□□ 0.12
CPNE3O75131 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC15.77■□□□□ 0.12
CPNE3O75131 DUX4L27-201ENST00000554796 1261 ntBASIC15.77■□□□□ 0.12
CPNE3O75131 DUT-210ENST00000559935 569 ntTSL 3 BASIC15.77■□□□□ 0.12
CPNE3O75131 MIR6080-201ENST00000617359 66 ntBASIC15.77■□□□□ 0.12
CPNE3O75131 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC15.77■□□□□ 0.12
CPNE3O75131 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
CPNE3O75131 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
CPNE3O75131 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CPNE3O75131 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
CPNE3O75131 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
CPNE3O75131 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CPNE3O75131 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
CPNE3O75131 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC15.77■□□□□ 0.11
CPNE3O75131 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC15.77■□□□□ 0.11
CPNE3O75131 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CPNE3O75131 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
CPNE3O75131 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC15.77■□□□□ 0.11
CPNE3O75131 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CPNE3O75131 AL136379.1-201ENST00000623471 2642 ntBASIC15.77■□□□□ 0.11
CPNE3O75131 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC15.77■□□□□ 0.11
CPNE3O75131 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
CPNE3O75131 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
CPNE3O75131 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
CPNE3O75131 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC15.77■□□□□ 0.11
CPNE3O75131 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
CPNE3O75131 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
CPNE3O75131 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
CPNE3O75131 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CPNE3O75131 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CPNE3O75131 NARF-206ENST00000457415 1668 ntTSL 5 BASIC15.76■□□□□ 0.11
CPNE3O75131 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CPNE3O75131 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC15.76■□□□□ 0.11
CPNE3O75131 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
CPNE3O75131 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC15.76■□□□□ 0.11
CPNE3O75131 MYB-201ENST00000316528 3571 ntTSL 5 BASIC15.76■□□□□ 0.11
CPNE3O75131 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CPNE3O75131 MYB-241ENST00000616088 3573 ntTSL 5 BASIC15.76■□□□□ 0.11
CPNE3O75131 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CPNE3O75131 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC15.76■□□□□ 0.11
CPNE3O75131 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC15.76■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms