Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CTNND1O60716 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CTNND1O60716 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC19■□□□□ 0.63
CTNND1O60716 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
CTNND1O60716 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CTNND1O60716 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CTNND1O60716 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CTNND1O60716 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
CTNND1O60716 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CTNND1O60716 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CTNND1O60716 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CTNND1O60716 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC19■□□□□ 0.63
CTNND1O60716 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC19■□□□□ 0.63
CTNND1O60716 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CTNND1O60716 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC19■□□□□ 0.63
CTNND1O60716 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
CTNND1O60716 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
CTNND1O60716 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CTNND1O60716 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CTNND1O60716 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CTNND1O60716 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CTNND1O60716 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC19■□□□□ 0.63
CTNND1O60716 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC19■□□□□ 0.63
CTNND1O60716 PTK7-212ENST00000476760 902 ntTSL 2 BASIC19■□□□□ 0.63
CTNND1O60716 ELK1P1-201ENST00000485699 580 ntBASIC19■□□□□ 0.63
CTNND1O60716 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC19■□□□□ 0.63
CTNND1O60716 GLI4-203ENST00000517468 963 ntTSL 5 BASIC19■□□□□ 0.63
CTNND1O60716 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC19■□□□□ 0.63
CTNND1O60716 AC123567.1-201ENST00000548294 1261 ntBASIC19■□□□□ 0.63
CTNND1O60716 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC19■□□□□ 0.63
CTNND1O60716 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
CTNND1O60716 AC017083.2-201ENST00000608069 979 ntBASIC19■□□□□ 0.63
CTNND1O60716 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC19■□□□□ 0.63
CTNND1O60716 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC19■□□□□ 0.63
CTNND1O60716 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC19■□□□□ 0.63
CTNND1O60716 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
CTNND1O60716 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC19■□□□□ 0.63
CTNND1O60716 U82695.1-201ENST00000635752 1889 ntBASIC19■□□□□ 0.63
CTNND1O60716 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CTNND1O60716 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC19■□□□□ 0.63
CTNND1O60716 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CTNND1O60716 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC19■□□□□ 0.63
CTNND1O60716 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CTNND1O60716 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
CTNND1O60716 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
CTNND1O60716 BANP-227ENST00000626016 2144 ntTSL 2 BASIC19■□□□□ 0.63
CTNND1O60716 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC19■□□□□ 0.63
CTNND1O60716 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC19■□□□□ 0.63
CTNND1O60716 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC19■□□□□ 0.63
CTNND1O60716 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC19■□□□□ 0.63
CTNND1O60716 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CTNND1O60716 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC18.99■□□□□ 0.63
CTNND1O60716 PCDHA12-202ENST00000613593 2588 ntBASIC18.99■□□□□ 0.63
CTNND1O60716 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC18.99■□□□□ 0.63
CTNND1O60716 CEP83-AS1-201ENST00000623122 2482 ntBASIC18.99■□□□□ 0.63
CTNND1O60716 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
CTNND1O60716 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
CTNND1O60716 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CTNND1O60716 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
CTNND1O60716 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC18.99■□□□□ 0.63
CTNND1O60716 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CTNND1O60716 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
CTNND1O60716 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC18.99■□□□□ 0.63
CTNND1O60716 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
CTNND1O60716 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC18.99■□□□□ 0.63
CTNND1O60716 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC18.99■□□□□ 0.63
CTNND1O60716 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC18.99■□□□□ 0.63
CTNND1O60716 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC18.99■□□□□ 0.63
CTNND1O60716 ACA64.2-201ENST00000459014 129 ntBASIC18.99■□□□□ 0.63
CTNND1O60716 RN7SL837P-201ENST00000463010 287 ntBASIC18.99■□□□□ 0.63
CTNND1O60716 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC18.99■□□□□ 0.63
CTNND1O60716 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC18.99■□□□□ 0.63
CTNND1O60716 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC18.99■□□□□ 0.63
CTNND1O60716 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
CTNND1O60716 RRP7BP-205ENST00000566851 833 ntBASIC18.99■□□□□ 0.63
CTNND1O60716 CTBP2P3-201ENST00000585629 1255 ntBASIC18.99■□□□□ 0.63
CTNND1O60716 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC18.99■□□□□ 0.63
CTNND1O60716 AC093726.1-201ENST00000608064 963 ntBASIC18.99■□□□□ 0.63
CTNND1O60716 AC074044.1-201ENST00000609673 707 ntBASIC18.99■□□□□ 0.63
CTNND1O60716 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC18.99■□□□□ 0.63
CTNND1O60716 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC18.99■□□□□ 0.63
CTNND1O60716 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
CTNND1O60716 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CTNND1O60716 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CTNND1O60716 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC18.99■□□□□ 0.63
CTNND1O60716 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CTNND1O60716 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CTNND1O60716 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CTNND1O60716 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
CTNND1O60716 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
CTNND1O60716 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CTNND1O60716 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
CTNND1O60716 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CTNND1O60716 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CTNND1O60716 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CTNND1O60716 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CTNND1O60716 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC18.98■□□□□ 0.63
CTNND1O60716 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
CTNND1O60716 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC18.98■□□□□ 0.63
CTNND1O60716 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms