Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
GFRA3O60609 RN7SL574P-201ENST00000581512 297 ntBASIC15.69■□□□□ 0.1
GFRA3O60609 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC15.69■□□□□ 0.1
GFRA3O60609 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC15.69■□□□□ 0.1
GFRA3O60609 ZNF586-204ENST00000598183 603 ntTSL 5 BASIC15.69■□□□□ 0.1
GFRA3O60609 AC011462.2-201ENST00000598887 344 ntTSL 5 BASIC15.69■□□□□ 0.1
GFRA3O60609 RNF146-211ENST00000609447 607 ntTSL 4 BASIC15.69■□□□□ 0.1
GFRA3O60609 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
GFRA3O60609 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC15.69■□□□□ 0.1
GFRA3O60609 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
GFRA3O60609 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC15.69■□□□□ 0.1
GFRA3O60609 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
GFRA3O60609 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
GFRA3O60609 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC15.69■□□□□ 0.1
GFRA3O60609 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
GFRA3O60609 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
GFRA3O60609 AL031598.1-201ENST00000561511 1773 ntBASIC15.69■□□□□ 0.1
GFRA3O60609 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
GFRA3O60609 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC15.69■□□□□ 0.1
GFRA3O60609 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC15.69■□□□□ 0.1
GFRA3O60609 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
GFRA3O60609 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
GFRA3O60609 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
GFRA3O60609 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
GFRA3O60609 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC15.68■□□□□ 0.1
GFRA3O60609 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
GFRA3O60609 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
GFRA3O60609 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
GFRA3O60609 AC135776.1-201ENST00000319817 2481 ntBASIC15.68■□□□□ 0.1
GFRA3O60609 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC15.68■□□□□ 0.1
GFRA3O60609 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC15.68■□□□□ 0.1
GFRA3O60609 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC15.68■□□□□ 0.1
GFRA3O60609 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC15.68■□□□□ 0.1
GFRA3O60609 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
GFRA3O60609 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
GFRA3O60609 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
GFRA3O60609 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
GFRA3O60609 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC15.68■□□□□ 0.1
GFRA3O60609 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC15.68■□□□□ 0.1
GFRA3O60609 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC15.68■□□□□ 0.1
GFRA3O60609 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
GFRA3O60609 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC15.68■□□□□ 0.1
GFRA3O60609 NUP210P1-202ENST00000504322 710 ntBASIC15.68■□□□□ 0.1
GFRA3O60609 CLNS1A-211ENST00000532069 898 ntTSL 3 BASIC15.68■□□□□ 0.1
GFRA3O60609 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC15.68■□□□□ 0.1
GFRA3O60609 NPM1P43-201ENST00000558669 786 ntBASIC15.68■□□□□ 0.1
GFRA3O60609 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC15.68■□□□□ 0.1
GFRA3O60609 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
GFRA3O60609 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC15.68■□□□□ 0.1
GFRA3O60609 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC15.68■□□□□ 0.1
GFRA3O60609 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
GFRA3O60609 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
GFRA3O60609 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
GFRA3O60609 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
GFRA3O60609 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC15.68■□□□□ 0.1
GFRA3O60609 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
GFRA3O60609 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
GFRA3O60609 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC15.68■□□□□ 0.1
GFRA3O60609 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC15.68■□□□□ 0.1
GFRA3O60609 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC15.68■□□□□ 0.1
GFRA3O60609 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
GFRA3O60609 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC15.67■□□□□ 0.1
GFRA3O60609 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
GFRA3O60609 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
GFRA3O60609 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
GFRA3O60609 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
GFRA3O60609 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
GFRA3O60609 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
GFRA3O60609 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
GFRA3O60609 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
GFRA3O60609 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC15.67■□□□□ 0.1
GFRA3O60609 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
GFRA3O60609 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC15.67■□□□□ 0.1
GFRA3O60609 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC15.67■□□□□ 0.1
GFRA3O60609 CST9L-201ENST00000376979 959 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
GFRA3O60609 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
GFRA3O60609 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC15.67■□□□□ 0.1
GFRA3O60609 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC15.67■□□□□ 0.1
GFRA3O60609 AC019205.2-201ENST00000442007 1083 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
GFRA3O60609 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC15.67■□□□□ 0.1
GFRA3O60609 VDAC1P7-201ENST00000462417 847 ntBASIC15.67■□□□□ 0.1
GFRA3O60609 C3orf38-204ENST00000486971 1259 ntTSL 2 BASIC15.67■□□□□ 0.1
GFRA3O60609 RBM4B-202ENST00000524637 867 ntTSL 5 BASIC15.67■□□□□ 0.1
GFRA3O60609 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
GFRA3O60609 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC15.67■□□□□ 0.1
GFRA3O60609 AC009712.1-201ENST00000564938 316 ntBASIC15.67■□□□□ 0.1
GFRA3O60609 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC15.67■□□□□ 0.1
GFRA3O60609 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC15.67■□□□□ 0.1
GFRA3O60609 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
GFRA3O60609 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
GFRA3O60609 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
GFRA3O60609 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
GFRA3O60609 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
GFRA3O60609 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
GFRA3O60609 PRG2-201ENST00000311862 1424 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
GFRA3O60609 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
GFRA3O60609 AC138932.1-201ENST00000534164 6830 ntBASIC15.67■□□□□ 0.1
GFRA3O60609 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
GFRA3O60609 LINC00470-210ENST00000584090 1334 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
GFRA3O60609 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms