Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 AF228730.5-201ENST00000530288 346 ntBASIC16.35■□□□□ 0.21
LDB2O43679 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LDB2O43679 LINC01225-203ENST00000563550 1244 ntBASIC16.35■□□□□ 0.21
LDB2O43679 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC16.35■□□□□ 0.21
LDB2O43679 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
LDB2O43679 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC16.35■□□□□ 0.21
LDB2O43679 AC027307.2-201ENST00000591252 911 ntBASIC16.35■□□□□ 0.21
LDB2O43679 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC16.35■□□□□ 0.21
LDB2O43679 NKG7-205ENST00000600427 520 ntTSL 3 BASIC16.35■□□□□ 0.21
LDB2O43679 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC16.35■□□□□ 0.21
LDB2O43679 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
LDB2O43679 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC16.35■□□□□ 0.21
LDB2O43679 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC16.35■□□□□ 0.21
LDB2O43679 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC16.35■□□□□ 0.21
LDB2O43679 AC010491.1-201ENST00000563101 2797 ntBASIC16.35■□□□□ 0.21
LDB2O43679 ELL2P1-201ENST00000413990 1906 ntBASIC16.35■□□□□ 0.21
LDB2O43679 GOLGA2P9-201ENST00000596977 1937 ntBASIC16.35■□□□□ 0.21
LDB2O43679 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC16.35■□□□□ 0.21
LDB2O43679 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
LDB2O43679 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC16.34■□□□□ 0.21
LDB2O43679 SUPT20HL2-201ENST00000486479 2409 ntBASIC16.34■□□□□ 0.21
LDB2O43679 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC16.34■□□□□ 0.21
LDB2O43679 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LDB2O43679 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
LDB2O43679 CD82-202ENST00000342935 967 ntTSL 5 BASIC16.34■□□□□ 0.21
LDB2O43679 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC16.34■□□□□ 0.21
LDB2O43679 AC142381.1-201ENST00000426099 345 ntBASIC16.34■□□□□ 0.21
LDB2O43679 SPCS2P4-201ENST00000436160 681 ntBASIC16.34■□□□□ 0.21
LDB2O43679 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC16.34■□□□□ 0.21
LDB2O43679 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC16.34■□□□□ 0.21
LDB2O43679 SPDYE11-202ENST00000450699 704 ntBASIC16.34■□□□□ 0.21
LDB2O43679 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC16.34■□□□□ 0.21
LDB2O43679 AC079140.1-201ENST00000508039 487 ntBASIC16.34■□□□□ 0.21
LDB2O43679 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC16.34■□□□□ 0.21
LDB2O43679 AC005829.1-201ENST00000570002 483 ntBASIC16.34■□□□□ 0.21
LDB2O43679 SPDYE9P-201ENST00000570642 692 ntBASIC16.34■□□□□ 0.21
LDB2O43679 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC16.34■□□□□ 0.21
LDB2O43679 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC16.34■□□□□ 0.21
LDB2O43679 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
LDB2O43679 AC010327.4-202ENST00000591484 748 ntBASIC16.34■□□□□ 0.21
LDB2O43679 AL365330.1-201ENST00000607459 531 ntBASIC16.34■□□□□ 0.21
LDB2O43679 SPDYE10P-202ENST00000612005 668 ntBASIC16.34■□□□□ 0.21
LDB2O43679 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
LDB2O43679 SPDYE8P-202ENST00000612377 668 ntBASIC16.34■□□□□ 0.21
LDB2O43679 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC16.34■□□□□ 0.21
LDB2O43679 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
LDB2O43679 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
LDB2O43679 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LDB2O43679 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
LDB2O43679 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
LDB2O43679 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
LDB2O43679 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
LDB2O43679 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LDB2O43679 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
LDB2O43679 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
LDB2O43679 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC16.34■□□□□ 0.21
LDB2O43679 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC16.34■□□□□ 0.21
LDB2O43679 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
LDB2O43679 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC16.34■□□□□ 0.21
LDB2O43679 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC16.34■□□□□ 0.21
LDB2O43679 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LDB2O43679 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
LDB2O43679 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
LDB2O43679 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
LDB2O43679 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LDB2O43679 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LDB2O43679 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
LDB2O43679 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
LDB2O43679 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
LDB2O43679 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
LDB2O43679 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
LDB2O43679 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
LDB2O43679 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
LDB2O43679 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
LDB2O43679 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LDB2O43679 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LDB2O43679 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC16.33■□□□□ 0.2
LDB2O43679 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LDB2O43679 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC16.33■□□□□ 0.2
LDB2O43679 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LDB2O43679 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
LDB2O43679 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LDB2O43679 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
LDB2O43679 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LDB2O43679 MIR346-201ENST00000362234 95 ntBASIC16.33■□□□□ 0.2
LDB2O43679 DNAJB3-201ENST00000446806 729 ntBASIC16.33■□□□□ 0.2
LDB2O43679 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC16.33■□□□□ 0.2
LDB2O43679 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC16.33■□□□□ 0.2
LDB2O43679 AC098859.1-201ENST00000502915 1238 ntBASIC16.33■□□□□ 0.2
LDB2O43679 YBX1P5-201ENST00000509441 847 ntBASIC16.33■□□□□ 0.2
LDB2O43679 RNF34-208ENST00000555076 593 ntTSL 3 BASIC16.33■□□□□ 0.2
LDB2O43679 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC16.33■□□□□ 0.2
LDB2O43679 MIR3687-2-201ENST00000577708 61 ntBASIC16.33■□□□□ 0.2
LDB2O43679 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC16.33■□□□□ 0.2
LDB2O43679 SSH2-211ENST00000590153 570 ntTSL 4 BASIC16.33■□□□□ 0.2
LDB2O43679 MIR3687-1-201ENST00000614492 61 ntBASIC16.33■□□□□ 0.2
LDB2O43679 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC16.33■□□□□ 0.2
LDB2O43679 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC16.33■□□□□ 0.2
LDB2O43679 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC16.33■□□□□ 0.2
LDB2O43679 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms