Protein–RNA interactions for Protein: O43316

PAX4, Paired box protein Pax-4, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX4O43316 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC11.78□□□□□ -0.52
PAX4O43316 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC11.78□□□□□ -0.52
PAX4O43316 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
PAX4O43316 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
PAX4O43316 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
PAX4O43316 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
PAX4O43316 OS9-205ENST00000413095 1660 ntTSL 2 BASIC11.78□□□□□ -0.52
PAX4O43316 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC11.78□□□□□ -0.52
PAX4O43316 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
PAX4O43316 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC11.77□□□□□ -0.52
PAX4O43316 KCP-203ENST00000610776 5108 ntTSL 5 BASIC11.77□□□□□ -0.52
PAX4O43316 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
PAX4O43316 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
PAX4O43316 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
PAX4O43316 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
PAX4O43316 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
PAX4O43316 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
PAX4O43316 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
PAX4O43316 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
PAX4O43316 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC11.77□□□□□ -0.53
PAX4O43316 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
PAX4O43316 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
PAX4O43316 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
PAX4O43316 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
PAX4O43316 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC11.77□□□□□ -0.53
PAX4O43316 AC006538.1-201ENST00000567905 1585 ntBASIC11.77□□□□□ -0.53
PAX4O43316 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
PAX4O43316 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
PAX4O43316 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
PAX4O43316 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
PAX4O43316 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
PAX4O43316 HLA-J-202ENST00000469281 1241 ntBASIC11.77□□□□□ -0.53
PAX4O43316 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC11.77□□□□□ -0.53
PAX4O43316 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC11.77□□□□□ -0.53
PAX4O43316 MMP17-203ENST00000535004 719 ntTSL 3 BASIC11.77□□□□□ -0.53
PAX4O43316 AL031432.2-201ENST00000566714 459 ntBASIC11.77□□□□□ -0.53
PAX4O43316 AC106730.1-201ENST00000566722 1090 ntBASIC11.77□□□□□ -0.53
PAX4O43316 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC11.77□□□□□ -0.53
PAX4O43316 AL928711.1-201ENST00000570165 459 ntBASIC11.77□□□□□ -0.53
PAX4O43316 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
PAX4O43316 MIR4492-201ENST00000581627 80 ntBASIC11.77□□□□□ -0.53
PAX4O43316 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC11.77□□□□□ -0.53
PAX4O43316 ACTL9-202ENST00000612068 1252 ntBASIC11.77□□□□□ -0.53
PAX4O43316 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC11.77□□□□□ -0.53
PAX4O43316 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
PAX4O43316 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
PAX4O43316 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC11.77□□□□□ -0.53
PAX4O43316 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
PAX4O43316 OR2I1P-210ENST00000642037 4691 ntBASIC11.77□□□□□ -0.53
PAX4O43316 SLC22A20-204ENST00000530038 1673 ntBASIC11.77□□□□□ -0.53
PAX4O43316 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
PAX4O43316 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
PAX4O43316 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
PAX4O43316 PCDH8P1-201ENST00000428983 2773 ntBASIC11.77□□□□□ -0.53
PAX4O43316 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
PAX4O43316 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
PAX4O43316 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
PAX4O43316 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC11.77□□□□□ -0.53
PAX4O43316 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
PAX4O43316 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
PAX4O43316 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC11.77□□□□□ -0.53
PAX4O43316 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
PAX4O43316 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
PAX4O43316 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
PAX4O43316 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
PAX4O43316 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
PAX4O43316 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
PAX4O43316 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
PAX4O43316 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC11.76□□□□□ -0.53
PAX4O43316 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC11.76□□□□□ -0.53
PAX4O43316 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC11.76□□□□□ -0.53
PAX4O43316 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
PAX4O43316 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC11.76□□□□□ -0.53
PAX4O43316 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
PAX4O43316 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
PAX4O43316 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
PAX4O43316 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC11.76□□□□□ -0.53
PAX4O43316 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
PAX4O43316 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
PAX4O43316 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
PAX4O43316 FLJ38576-201ENST00000623820 2459 ntBASIC11.76□□□□□ -0.53
PAX4O43316 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
PAX4O43316 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
PAX4O43316 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC11.76□□□□□ -0.53
PAX4O43316 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
PAX4O43316 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
PAX4O43316 AL022342.1-201ENST00000400363 863 ntBASIC11.76□□□□□ -0.53
PAX4O43316 MIR940-201ENST00000401276 94 ntBASIC11.76□□□□□ -0.53
PAX4O43316 YIPF7-202ENST00000415895 1196 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
PAX4O43316 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC11.76□□□□□ -0.53
PAX4O43316 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
PAX4O43316 SLC25A1P1-201ENST00000528351 927 ntBASIC11.76□□□□□ -0.53
PAX4O43316 MAL2-202ENST00000531508 892 ntTSL 3 BASIC11.76□□□□□ -0.53
PAX4O43316 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC11.76□□□□□ -0.53
PAX4O43316 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC11.76□□□□□ -0.53
PAX4O43316 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
PAX4O43316 PIN1-206ENST00000587625 878 ntTSL 2 BASIC11.76□□□□□ -0.53
PAX4O43316 SIGLEC29P-201ENST00000599873 1114 ntBASIC11.76□□□□□ -0.53
PAX4O43316 AC005786.4-201ENST00000623369 682 ntBASIC11.76□□□□□ -0.53
PAX4O43316 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC11.76□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms