Protein–RNA interactions for Protein: O43189

PHF1, PHD finger protein 1, humanhuman

Predicted RBP Predictions only

Length 567 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1O43189 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC14.24□□□□□ -0.13
PHF1O43189 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
PHF1O43189 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PHF1O43189 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC14.24□□□□□ -0.13
PHF1O43189 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC14.24□□□□□ -0.13
PHF1O43189 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
PHF1O43189 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC14.24□□□□□ -0.13
PHF1O43189 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PHF1O43189 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC14.24□□□□□ -0.13
PHF1O43189 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PHF1O43189 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
PHF1O43189 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC14.24□□□□□ -0.13
PHF1O43189 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PHF1O43189 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
PHF1O43189 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PHF1O43189 AC132872.4-202ENST00000622924 2756 ntBASIC14.23□□□□□ -0.13
PHF1O43189 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC14.23□□□□□ -0.13
PHF1O43189 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
PHF1O43189 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC14.23□□□□□ -0.13
PHF1O43189 MYB-242ENST00000618728 3545 ntTSL 5 BASIC14.23□□□□□ -0.13
PHF1O43189 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PHF1O43189 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC14.23□□□□□ -0.13
PHF1O43189 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
PHF1O43189 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PHF1O43189 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PHF1O43189 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
PHF1O43189 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
PHF1O43189 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
PHF1O43189 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
PHF1O43189 METTL26-204ENST00000397665 558 ntTSL 2 BASIC14.23□□□□□ -0.13
PHF1O43189 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC14.23□□□□□ -0.13
PHF1O43189 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
PHF1O43189 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC14.23□□□□□ -0.13
PHF1O43189 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
PHF1O43189 RIN3-211ENST00000557762 517 ntTSL 3 BASIC14.23□□□□□ -0.13
PHF1O43189 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC14.23□□□□□ -0.13
PHF1O43189 AC010654.1-201ENST00000615722 808 ntBASIC14.23□□□□□ -0.13
PHF1O43189 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC14.23□□□□□ -0.13
PHF1O43189 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC14.23□□□□□ -0.13
PHF1O43189 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
PHF1O43189 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
PHF1O43189 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
PHF1O43189 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
PHF1O43189 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
PHF1O43189 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
PHF1O43189 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PHF1O43189 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PHF1O43189 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
PHF1O43189 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
PHF1O43189 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PHF1O43189 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
PHF1O43189 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
PHF1O43189 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
PHF1O43189 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
PHF1O43189 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC14.23□□□□□ -0.13
PHF1O43189 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PHF1O43189 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
PHF1O43189 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC14.22□□□□□ -0.13
PHF1O43189 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PHF1O43189 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
PHF1O43189 EGFEM1P-202ENST00000431685 1563 ntBASIC14.22□□□□□ -0.13
PHF1O43189 STX3-203ENST00000529177 1571 ntTSL 2 BASIC14.22□□□□□ -0.13
PHF1O43189 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
PHF1O43189 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC14.22□□□□□ -0.13
PHF1O43189 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
PHF1O43189 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
PHF1O43189 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PHF1O43189 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
PHF1O43189 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC14.22□□□□□ -0.13
PHF1O43189 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC14.22□□□□□ -0.13
PHF1O43189 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PHF1O43189 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
PHF1O43189 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
PHF1O43189 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC14.22□□□□□ -0.13
PHF1O43189 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
PHF1O43189 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
PHF1O43189 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PHF1O43189 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC14.22□□□□□ -0.13
PHF1O43189 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
PHF1O43189 HCG4B-203ENST00000450128 991 ntBASIC14.22□□□□□ -0.13
PHF1O43189 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
PHF1O43189 CD63-210ENST00000550776 870 ntTSL 5 BASIC14.22□□□□□ -0.13
PHF1O43189 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC14.22□□□□□ -0.13
PHF1O43189 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC14.22□□□□□ -0.13
PHF1O43189 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC14.22□□□□□ -0.13
PHF1O43189 CYB561-216ENST00000582297 897 ntTSL 3 BASIC14.22□□□□□ -0.13
PHF1O43189 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PHF1O43189 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
PHF1O43189 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PHF1O43189 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC14.22□□□□□ -0.13
PHF1O43189 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC14.22□□□□□ -0.13
PHF1O43189 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
PHF1O43189 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PHF1O43189 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
PHF1O43189 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
PHF1O43189 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PHF1O43189 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC14.22□□□□□ -0.13
PHF1O43189 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
PHF1O43189 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
PHF1O43189 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms