Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC16.34■□□□□ 0.21
PHGDHO43175 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC16.34■□□□□ 0.21
PHGDHO43175 U1.21-201ENST00000580816 167 ntBASIC16.34■□□□□ 0.21
PHGDHO43175 RN7SL510P-201ENST00000581311 263 ntBASIC16.34■□□□□ 0.21
PHGDHO43175 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC16.34■□□□□ 0.21
PHGDHO43175 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
PHGDHO43175 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC16.34■□□□□ 0.21
PHGDHO43175 AL031008.1-201ENST00000619963 541 ntBASIC16.34■□□□□ 0.21
PHGDHO43175 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC16.34■□□□□ 0.21
PHGDHO43175 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC16.34■□□□□ 0.21
PHGDHO43175 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PHGDHO43175 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
PHGDHO43175 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PHGDHO43175 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
PHGDHO43175 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PHGDHO43175 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PHGDHO43175 LINC02447-202ENST00000501888 2146 ntBASIC16.34■□□□□ 0.21
PHGDHO43175 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC16.34■□□□□ 0.21
PHGDHO43175 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PHGDHO43175 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PHGDHO43175 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
PHGDHO43175 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PHGDHO43175 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PHGDHO43175 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
PHGDHO43175 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC16.33■□□□□ 0.21
PHGDHO43175 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
PHGDHO43175 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
PHGDHO43175 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
PHGDHO43175 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
PHGDHO43175 AP003680.1-201ENST00000598970 3660 ntBASIC16.33■□□□□ 0.21
PHGDHO43175 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
PHGDHO43175 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
PHGDHO43175 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.21
PHGDHO43175 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC16.33■□□□□ 0.21
PHGDHO43175 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC16.33■□□□□ 0.21
PHGDHO43175 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
PHGDHO43175 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.21
PHGDHO43175 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
PHGDHO43175 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
PHGDHO43175 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PHGDHO43175 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PHGDHO43175 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
PHGDHO43175 POLD4-207ENST00000531239 584 ntTSL 2 BASIC16.33■□□□□ 0.2
PHGDHO43175 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
PHGDHO43175 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PHGDHO43175 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC16.33■□□□□ 0.2
PHGDHO43175 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
PHGDHO43175 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC16.33■□□□□ 0.2
PHGDHO43175 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC16.33■□□□□ 0.2
PHGDHO43175 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PHGDHO43175 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PHGDHO43175 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PHGDHO43175 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PHGDHO43175 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
PHGDHO43175 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PHGDHO43175 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC16.33■□□□□ 0.2
PHGDHO43175 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PHGDHO43175 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PHGDHO43175 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
PHGDHO43175 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PHGDHO43175 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC16.33■□□□□ 0.2
PHGDHO43175 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PHGDHO43175 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
PHGDHO43175 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PHGDHO43175 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PHGDHO43175 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PHGDHO43175 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
PHGDHO43175 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PHGDHO43175 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PHGDHO43175 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
PHGDHO43175 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC16.32■□□□□ 0.2
PHGDHO43175 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC16.32■□□□□ 0.2
PHGDHO43175 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PHGDHO43175 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PHGDHO43175 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC16.32■□□□□ 0.2
PHGDHO43175 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC16.32■□□□□ 0.2
PHGDHO43175 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PHGDHO43175 AC098831.1-202ENST00000438821 336 ntBASIC16.32■□□□□ 0.2
PHGDHO43175 VILL-207ENST00000465644 1857 ntTSL 5 BASIC16.32■□□□□ 0.2
PHGDHO43175 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC16.32■□□□□ 0.2
PHGDHO43175 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
PHGDHO43175 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC16.32■□□□□ 0.2
PHGDHO43175 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
PHGDHO43175 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC16.32■□□□□ 0.2
PHGDHO43175 AL160237.2-201ENST00000556165 472 ntBASIC16.32■□□□□ 0.2
PHGDHO43175 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC16.32■□□□□ 0.2
PHGDHO43175 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PHGDHO43175 CALM3-211ENST00000598871 561 ntTSL 4 BASIC16.32■□□□□ 0.2
PHGDHO43175 AL031055.1-201ENST00000606362 631 ntBASIC16.32■□□□□ 0.2
PHGDHO43175 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC16.32■□□□□ 0.2
PHGDHO43175 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
PHGDHO43175 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PHGDHO43175 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PHGDHO43175 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PHGDHO43175 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
PHGDHO43175 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
PHGDHO43175 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
PHGDHO43175 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PHGDHO43175 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC16.31■□□□□ 0.2
PHGDHO43175 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms