Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
ATP2A1O14983 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC18.66■□□□□ 0.58
ATP2A1O14983 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ATP2A1O14983 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC18.66■□□□□ 0.58
ATP2A1O14983 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC18.66■□□□□ 0.58
ATP2A1O14983 AC044860.1-202ENST00000559481 777 ntBASIC18.66■□□□□ 0.58
ATP2A1O14983 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC18.66■□□□□ 0.58
ATP2A1O14983 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ATP2A1O14983 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
ATP2A1O14983 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ATP2A1O14983 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ATP2A1O14983 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ATP2A1O14983 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC18.66■□□□□ 0.58
ATP2A1O14983 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ATP2A1O14983 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC18.66■□□□□ 0.58
ATP2A1O14983 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
ATP2A1O14983 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ATP2A1O14983 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
ATP2A1O14983 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC18.65■□□□□ 0.58
ATP2A1O14983 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ATP2A1O14983 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
ATP2A1O14983 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ATP2A1O14983 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC18.65■□□□□ 0.58
ATP2A1O14983 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC18.65■□□□□ 0.58
ATP2A1O14983 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC18.65■□□□□ 0.58
ATP2A1O14983 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ATP2A1O14983 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
ATP2A1O14983 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC18.65■□□□□ 0.58
ATP2A1O14983 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ATP2A1O14983 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ATP2A1O14983 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC18.65■□□□□ 0.58
ATP2A1O14983 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC18.65■□□□□ 0.58
ATP2A1O14983 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC18.65■□□□□ 0.58
ATP2A1O14983 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC18.65■□□□□ 0.58
ATP2A1O14983 SDHAP3-202ENST00000515467 728 ntBASIC18.65■□□□□ 0.58
ATP2A1O14983 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC18.65■□□□□ 0.58
ATP2A1O14983 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC18.65■□□□□ 0.58
ATP2A1O14983 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ATP2A1O14983 AC104794.3-201ENST00000566840 1248 ntBASIC18.65■□□□□ 0.58
ATP2A1O14983 MIR4321-201ENST00000592276 80 ntBASIC18.65■□□□□ 0.58
ATP2A1O14983 AC004790.1-201ENST00000612686 536 ntBASIC18.65■□□□□ 0.58
ATP2A1O14983 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC18.65■□□□□ 0.58
ATP2A1O14983 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC18.65■□□□□ 0.58
ATP2A1O14983 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ATP2A1O14983 CEP83-AS1-201ENST00000623122 2482 ntBASIC18.65■□□□□ 0.58
ATP2A1O14983 AC005622.1-201ENST00000636801 1703 ntBASIC18.65■□□□□ 0.58
ATP2A1O14983 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
ATP2A1O14983 CU639417.3-201ENST00000624240 1404 ntBASIC18.65■□□□□ 0.58
ATP2A1O14983 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
ATP2A1O14983 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC18.64■□□□□ 0.58
ATP2A1O14983 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC18.64■□□□□ 0.58
ATP2A1O14983 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
ATP2A1O14983 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
ATP2A1O14983 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
ATP2A1O14983 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
ATP2A1O14983 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
ATP2A1O14983 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ATP2A1O14983 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
ATP2A1O14983 PRORSD1P-202ENST00000563365 2154 ntBASIC18.64■□□□□ 0.57
ATP2A1O14983 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ATP2A1O14983 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
ATP2A1O14983 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ATP2A1O14983 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC18.64■□□□□ 0.57
ATP2A1O14983 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ATP2A1O14983 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC18.64■□□□□ 0.57
ATP2A1O14983 AC140912.1-201ENST00000577171 1054 ntBASIC18.64■□□□□ 0.57
ATP2A1O14983 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC18.64■□□□□ 0.57
ATP2A1O14983 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC18.64■□□□□ 0.57
ATP2A1O14983 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC18.64■□□□□ 0.57
ATP2A1O14983 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC18.64■□□□□ 0.57
ATP2A1O14983 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC18.64■□□□□ 0.57
ATP2A1O14983 U82695.1-201ENST00000635752 1889 ntBASIC18.64■□□□□ 0.57
ATP2A1O14983 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ATP2A1O14983 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ATP2A1O14983 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
ATP2A1O14983 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC18.64■□□□□ 0.57
ATP2A1O14983 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC18.64■□□□□ 0.57
ATP2A1O14983 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ATP2A1O14983 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ATP2A1O14983 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC18.64■□□□□ 0.57
ATP2A1O14983 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC18.63■□□□□ 0.57
ATP2A1O14983 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ATP2A1O14983 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
ATP2A1O14983 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ATP2A1O14983 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ATP2A1O14983 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
ATP2A1O14983 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
ATP2A1O14983 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ATP2A1O14983 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC18.63■□□□□ 0.57
ATP2A1O14983 AC005915.1-201ENST00000624912 2018 ntBASIC18.63■□□□□ 0.57
ATP2A1O14983 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC18.63■□□□□ 0.57
ATP2A1O14983 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC18.63■□□□□ 0.57
ATP2A1O14983 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC18.63■□□□□ 0.57
ATP2A1O14983 GNAQP1-201ENST00000444815 1067 ntBASIC18.63■□□□□ 0.57
ATP2A1O14983 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ATP2A1O14983 AC093004.1-201ENST00000508850 424 ntBASIC18.63■□□□□ 0.57
ATP2A1O14983 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC18.63■□□□□ 0.57
ATP2A1O14983 RAB35-202ENST00000534951 939 ntTSL 2 BASIC18.63■□□□□ 0.57
ATP2A1O14983 MIR6069-201ENST00000620069 79 ntBASIC18.63■□□□□ 0.57
ATP2A1O14983 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms