Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC15.68■□□□□ 0.1
PDLIM1O00151 AC122714.2-201ENST00000502787 707 ntBASIC15.68■□□□□ 0.1
PDLIM1O00151 FOSL1P1-201ENST00000511041 816 ntBASIC15.68■□□□□ 0.1
PDLIM1O00151 STK19B-204ENST00000512515 211 ntBASIC15.68■□□□□ 0.1
PDLIM1O00151 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC15.68■□□□□ 0.1
PDLIM1O00151 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC15.68■□□□□ 0.1
PDLIM1O00151 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PDLIM1O00151 AC114341.1-201ENST00000618070 349 ntBASIC15.68■□□□□ 0.1
PDLIM1O00151 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC15.68■□□□□ 0.1
PDLIM1O00151 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PDLIM1O00151 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PDLIM1O00151 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PDLIM1O00151 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PDLIM1O00151 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PDLIM1O00151 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC15.68■□□□□ 0.1
PDLIM1O00151 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PDLIM1O00151 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC15.68■□□□□ 0.1
PDLIM1O00151 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC15.68■□□□□ 0.1
PDLIM1O00151 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
PDLIM1O00151 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
PDLIM1O00151 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
PDLIM1O00151 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PDLIM1O00151 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PDLIM1O00151 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PDLIM1O00151 AC006449.6-201ENST00000612330 2296 ntBASIC15.68■□□□□ 0.1
PDLIM1O00151 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC15.67■□□□□ 0.1
PDLIM1O00151 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
PDLIM1O00151 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PDLIM1O00151 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC15.67■□□□□ 0.1
PDLIM1O00151 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC15.67■□□□□ 0.1
PDLIM1O00151 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC15.67■□□□□ 0.1
PDLIM1O00151 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PDLIM1O00151 TP73-AS1-210ENST00000637775 1455 ntBASIC15.67■□□□□ 0.1
PDLIM1O00151 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PDLIM1O00151 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
PDLIM1O00151 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PDLIM1O00151 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PDLIM1O00151 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PDLIM1O00151 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PDLIM1O00151 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
PDLIM1O00151 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
PDLIM1O00151 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
PDLIM1O00151 AC103564.2-201ENST00000432853 1299 ntBASIC15.67■□□□□ 0.1
PDLIM1O00151 KRT18P31-201ENST00000506277 1292 ntBASIC15.67■□□□□ 0.1
PDLIM1O00151 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC15.67■□□□□ 0.1
PDLIM1O00151 AC011467.2-201ENST00000598425 242 ntBASIC15.67■□□□□ 0.1
PDLIM1O00151 AL121772.3-201ENST00000610840 674 ntBASIC15.67■□□□□ 0.1
PDLIM1O00151 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
PDLIM1O00151 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC15.67■□□□□ 0.1
PDLIM1O00151 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC15.67■□□□□ 0.1
PDLIM1O00151 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
PDLIM1O00151 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC15.67■□□□□ 0.1
PDLIM1O00151 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PDLIM1O00151 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC15.67■□□□□ 0.1
PDLIM1O00151 AC009090.5-201ENST00000624886 2285 ntBASIC15.67■□□□□ 0.1
PDLIM1O00151 ING5-213ENST00000636051 4199 ntTSL 5 BASIC15.67■□□□□ 0.1
PDLIM1O00151 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
PDLIM1O00151 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PDLIM1O00151 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PDLIM1O00151 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PDLIM1O00151 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC15.67■□□□□ 0.1
PDLIM1O00151 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC15.67■□□□□ 0.1
PDLIM1O00151 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PDLIM1O00151 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC15.67■□□□□ 0.1
PDLIM1O00151 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
PDLIM1O00151 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
PDLIM1O00151 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PDLIM1O00151 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
PDLIM1O00151 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC15.67■□□□□ 0.1
PDLIM1O00151 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PDLIM1O00151 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PDLIM1O00151 PPT1-215ENST00000641471 2368 ntBASIC15.67■□□□□ 0.1
PDLIM1O00151 NORAD-201ENST00000565493 5339 ntBASIC15.66■□□□□ 0.1
PDLIM1O00151 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PDLIM1O00151 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
PDLIM1O00151 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
PDLIM1O00151 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PDLIM1O00151 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
PDLIM1O00151 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
PDLIM1O00151 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PDLIM1O00151 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PDLIM1O00151 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PDLIM1O00151 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PDLIM1O00151 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
PDLIM1O00151 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
PDLIM1O00151 AL450487.1-201ENST00000426799 995 ntBASIC15.66■□□□□ 0.1
PDLIM1O00151 KRT16P4-201ENST00000453883 522 ntBASIC15.66■□□□□ 0.1
PDLIM1O00151 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PDLIM1O00151 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
PDLIM1O00151 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC15.66■□□□□ 0.1
PDLIM1O00151 AC138894.3-201ENST00000603787 634 ntBASIC15.66■□□□□ 0.1
PDLIM1O00151 IGHV3OR16-7-201ENST00000604106 360 ntBASIC15.66■□□□□ 0.1
PDLIM1O00151 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC15.66■□□□□ 0.1
PDLIM1O00151 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PDLIM1O00151 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PDLIM1O00151 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
PDLIM1O00151 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC15.66■□□□□ 0.1
PDLIM1O00151 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC15.66■□□□□ 0.1
PDLIM1O00151 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC15.66■□□□□ 0.1
PDLIM1O00151 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms