Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
CCDC188H7C350 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC17.06■□□□□ 0.32
CCDC188H7C350 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC188H7C350 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
CCDC188H7C350 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC188H7C350 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
CCDC188H7C350 LOX-206ENST00000639739 1626 ntTSL 5 BASIC17.06■□□□□ 0.32
CCDC188H7C350 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC17.06■□□□□ 0.32
CCDC188H7C350 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC17.06■□□□□ 0.32
CCDC188H7C350 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC17.06■□□□□ 0.32
CCDC188H7C350 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC188H7C350 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC188H7C350 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC188H7C350 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC17.05■□□□□ 0.32
CCDC188H7C350 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC17.05■□□□□ 0.32
CCDC188H7C350 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
CCDC188H7C350 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC188H7C350 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC188H7C350 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC188H7C350 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
CCDC188H7C350 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC188H7C350 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC188H7C350 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC17.05■□□□□ 0.32
CCDC188H7C350 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
CCDC188H7C350 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC17.05■□□□□ 0.32
CCDC188H7C350 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC188H7C350 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC188H7C350 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC188H7C350 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC188H7C350 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC17.05■□□□□ 0.32
CCDC188H7C350 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC188H7C350 ISCU-203ENST00000431221 799 ntTSL 2 BASIC17.05■□□□□ 0.32
CCDC188H7C350 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC188H7C350 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC17.05■□□□□ 0.32
CCDC188H7C350 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
CCDC188H7C350 SDCCAG3P1-201ENST00000589292 1150 ntBASIC17.05■□□□□ 0.32
CCDC188H7C350 MTDHP3-201ENST00000594186 672 ntBASIC17.05■□□□□ 0.32
CCDC188H7C350 MTDHP4-201ENST00000600287 670 ntBASIC17.05■□□□□ 0.32
CCDC188H7C350 AC138894.3-201ENST00000603787 634 ntBASIC17.05■□□□□ 0.32
CCDC188H7C350 GGTLC5P-201ENST00000617623 998 ntBASIC17.05■□□□□ 0.32
CCDC188H7C350 AC136621.1-201ENST00000624017 2304 ntBASIC17.05■□□□□ 0.32
CCDC188H7C350 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
CCDC188H7C350 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC188H7C350 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC17.05■□□□□ 0.32
CCDC188H7C350 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
CCDC188H7C350 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC188H7C350 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
CCDC188H7C350 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC188H7C350 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC188H7C350 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC188H7C350 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC188H7C350 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC17.04■□□□□ 0.32
CCDC188H7C350 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC188H7C350 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC188H7C350 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC188H7C350 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC17.04■□□□□ 0.32
CCDC188H7C350 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC188H7C350 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC188H7C350 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC17.04■□□□□ 0.32
CCDC188H7C350 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC188H7C350 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC188H7C350 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC188H7C350 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC17.04■□□□□ 0.32
CCDC188H7C350 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC17.04■□□□□ 0.32
CCDC188H7C350 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC188H7C350 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC17.04■□□□□ 0.32
CCDC188H7C350 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC17.04■□□□□ 0.32
CCDC188H7C350 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC17.04■□□□□ 0.32
CCDC188H7C350 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC188H7C350 ELK2BP-201ENST00000415014 1224 ntBASIC17.04■□□□□ 0.32
CCDC188H7C350 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC17.04■□□□□ 0.32
CCDC188H7C350 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC17.04■□□□□ 0.32
CCDC188H7C350 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC188H7C350 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC188H7C350 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC188H7C350 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC188H7C350 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC17.04■□□□□ 0.32
CCDC188H7C350 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC17.04■□□□□ 0.32
CCDC188H7C350 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC188H7C350 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC188H7C350 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC17.04■□□□□ 0.32
CCDC188H7C350 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC188H7C350 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
CCDC188H7C350 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC188H7C350 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC188H7C350 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC17.03■□□□□ 0.32
CCDC188H7C350 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC188H7C350 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC188H7C350 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
CCDC188H7C350 FAM45BP-202ENST00000592932 1624 ntBASIC17.03■□□□□ 0.32
CCDC188H7C350 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC188H7C350 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC188H7C350 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC188H7C350 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC188H7C350 AC006504.4-201ENST00000592118 1568 ntBASIC17.03■□□□□ 0.32
CCDC188H7C350 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
CCDC188H7C350 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
CCDC188H7C350 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC17.03■□□□□ 0.32
CCDC188H7C350 ING5-213ENST00000636051 4199 ntTSL 5 BASIC17.03■□□□□ 0.32
CCDC188H7C350 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms