Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NPIPB4C9JG80 AC010491.1-201ENST00000563101 2797 ntBASIC14.46□□□□□ -0.09
NPIPB4C9JG80 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NPIPB4C9JG80 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
NPIPB4C9JG80 GOLGA2P9-201ENST00000596977 1937 ntBASIC14.46□□□□□ -0.09
NPIPB4C9JG80 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
NPIPB4C9JG80 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
NPIPB4C9JG80 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC14.46□□□□□ -0.09
NPIPB4C9JG80 LINC02199-201ENST00000506655 2702 ntBASIC14.46□□□□□ -0.09
NPIPB4C9JG80 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
NPIPB4C9JG80 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
NPIPB4C9JG80 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
NPIPB4C9JG80 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
NPIPB4C9JG80 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC14.46□□□□□ -0.1
NPIPB4C9JG80 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC14.46□□□□□ -0.1
NPIPB4C9JG80 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
NPIPB4C9JG80 FOXO1B-201ENST00000504678 1527 ntBASIC14.46□□□□□ -0.1
NPIPB4C9JG80 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
NPIPB4C9JG80 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
NPIPB4C9JG80 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
NPIPB4C9JG80 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NPIPB4C9JG80 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
NPIPB4C9JG80 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
NPIPB4C9JG80 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NPIPB4C9JG80 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
NPIPB4C9JG80 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NPIPB4C9JG80 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC14.45□□□□□ -0.1
NPIPB4C9JG80 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
NPIPB4C9JG80 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NPIPB4C9JG80 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC14.45□□□□□ -0.1
NPIPB4C9JG80 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
NPIPB4C9JG80 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC14.45□□□□□ -0.1
NPIPB4C9JG80 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NPIPB4C9JG80 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
NPIPB4C9JG80 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NPIPB4C9JG80 MIR346-201ENST00000362234 95 ntBASIC14.45□□□□□ -0.1
NPIPB4C9JG80 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
NPIPB4C9JG80 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NPIPB4C9JG80 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
NPIPB4C9JG80 MIR574-201ENST00000385209 96 ntBASIC14.45□□□□□ -0.1
NPIPB4C9JG80 YBX2P1-201ENST00000394192 760 ntBASIC14.45□□□□□ -0.1
NPIPB4C9JG80 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC14.45□□□□□ -0.1
NPIPB4C9JG80 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC14.45□□□□□ -0.1
NPIPB4C9JG80 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC14.45□□□□□ -0.1
NPIPB4C9JG80 CBFB-203ENST00000561924 584 ntTSL 5 BASIC14.45□□□□□ -0.1
NPIPB4C9JG80 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC14.45□□□□□ -0.1
NPIPB4C9JG80 AL138918.1-201ENST00000568306 659 ntBASIC14.45□□□□□ -0.1
NPIPB4C9JG80 AC027307.2-201ENST00000591252 911 ntBASIC14.45□□□□□ -0.1
NPIPB4C9JG80 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC14.45□□□□□ -0.1
NPIPB4C9JG80 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC14.45□□□□□ -0.1
NPIPB4C9JG80 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC14.45□□□□□ -0.1
NPIPB4C9JG80 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
NPIPB4C9JG80 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NPIPB4C9JG80 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
NPIPB4C9JG80 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC14.45□□□□□ -0.1
NPIPB4C9JG80 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
NPIPB4C9JG80 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NPIPB4C9JG80 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC14.45□□□□□ -0.1
NPIPB4C9JG80 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
NPIPB4C9JG80 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NPIPB4C9JG80 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NPIPB4C9JG80 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NPIPB4C9JG80 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
NPIPB4C9JG80 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
NPIPB4C9JG80 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NPIPB4C9JG80 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NPIPB4C9JG80 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC14.44□□□□□ -0.1
NPIPB4C9JG80 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
NPIPB4C9JG80 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
NPIPB4C9JG80 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NPIPB4C9JG80 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
NPIPB4C9JG80 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC14.44□□□□□ -0.1
NPIPB4C9JG80 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NPIPB4C9JG80 PMP22-202ENST00000395936 816 ntTSL 3 BASIC14.44□□□□□ -0.1
NPIPB4C9JG80 PP14571-201ENST00000404327 934 ntTSL 2 BASIC14.44□□□□□ -0.1
NPIPB4C9JG80 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
NPIPB4C9JG80 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
NPIPB4C9JG80 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
NPIPB4C9JG80 MTDHP5-201ENST00000598980 586 ntBASIC14.44□□□□□ -0.1
NPIPB4C9JG80 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC14.44□□□□□ -0.1
NPIPB4C9JG80 AC026120.1-201ENST00000611536 926 ntBASIC14.44□□□□□ -0.1
NPIPB4C9JG80 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NPIPB4C9JG80 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NPIPB4C9JG80 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NPIPB4C9JG80 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NPIPB4C9JG80 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
NPIPB4C9JG80 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
NPIPB4C9JG80 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC14.44□□□□□ -0.1
NPIPB4C9JG80 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
NPIPB4C9JG80 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NPIPB4C9JG80 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
NPIPB4C9JG80 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
NPIPB4C9JG80 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NPIPB4C9JG80 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC14.44□□□□□ -0.1
NPIPB4C9JG80 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC14.43□□□□□ -0.1
NPIPB4C9JG80 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC14.43□□□□□ -0.1
NPIPB4C9JG80 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NPIPB4C9JG80 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC14.43□□□□□ -0.1
NPIPB4C9JG80 HLA-DQB2-231ENST00000435145 2026 ntBASIC14.43□□□□□ -0.1
NPIPB4C9JG80 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC14.43□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms