Protein–RNA interactions for Protein: A6NDB9

PALM3, Paralemmin-3, humanhuman

Predicted RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PALM3A6NDB9 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
PALM3A6NDB9 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
PALM3A6NDB9 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PALM3A6NDB9 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC18.83■□□□□ 0.61
PALM3A6NDB9 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PALM3A6NDB9 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
PALM3A6NDB9 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PALM3A6NDB9 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC18.83■□□□□ 0.6
PALM3A6NDB9 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
PALM3A6NDB9 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC18.83■□□□□ 0.6
PALM3A6NDB9 MIR943-201ENST00000401286 94 ntBASIC18.83■□□□□ 0.6
PALM3A6NDB9 TREML5P-201ENST00000421694 576 ntBASIC18.83■□□□□ 0.6
PALM3A6NDB9 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC18.83■□□□□ 0.6
PALM3A6NDB9 AC055876.3-201ENST00000431496 288 ntBASIC18.83■□□□□ 0.6
PALM3A6NDB9 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC18.83■□□□□ 0.6
PALM3A6NDB9 AC097493.3-201ENST00000509725 367 ntBASIC18.83■□□□□ 0.6
PALM3A6NDB9 AC069120.2-201ENST00000524091 540 ntBASIC18.83■□□□□ 0.6
PALM3A6NDB9 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC18.83■□□□□ 0.6
PALM3A6NDB9 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC18.83■□□□□ 0.6
PALM3A6NDB9 AL158211.3-201ENST00000607385 239 ntBASIC18.83■□□□□ 0.6
PALM3A6NDB9 AC138649.4-201ENST00000612222 287 ntBASIC18.83■□□□□ 0.6
PALM3A6NDB9 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC18.83■□□□□ 0.6
PALM3A6NDB9 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC18.83■□□□□ 0.6
PALM3A6NDB9 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PALM3A6NDB9 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PALM3A6NDB9 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
PALM3A6NDB9 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PALM3A6NDB9 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PALM3A6NDB9 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC18.83■□□□□ 0.6
PALM3A6NDB9 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PALM3A6NDB9 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC18.82■□□□□ 0.6
PALM3A6NDB9 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
PALM3A6NDB9 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC18.82■□□□□ 0.6
PALM3A6NDB9 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PALM3A6NDB9 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PALM3A6NDB9 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC18.82■□□□□ 0.6
PALM3A6NDB9 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC18.82■□□□□ 0.6
PALM3A6NDB9 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC18.82■□□□□ 0.6
PALM3A6NDB9 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
PALM3A6NDB9 AL118508.1-201ENST00000613502 2345 ntBASIC18.82■□□□□ 0.6
PALM3A6NDB9 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PALM3A6NDB9 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PALM3A6NDB9 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
PALM3A6NDB9 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PALM3A6NDB9 RBM39-205ENST00000397370 612 ntTSL 2 BASIC18.82■□□□□ 0.6
PALM3A6NDB9 AC245100.5-201ENST00000452108 331 ntBASIC18.82■□□□□ 0.6
PALM3A6NDB9 PAM16-215ENST00000577031 548 ntTSL 4 BASIC18.82■□□□□ 0.6
PALM3A6NDB9 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
PALM3A6NDB9 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PALM3A6NDB9 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PALM3A6NDB9 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
PALM3A6NDB9 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
PALM3A6NDB9 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
PALM3A6NDB9 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC18.82■□□□□ 0.6
PALM3A6NDB9 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PALM3A6NDB9 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PALM3A6NDB9 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC18.82■□□□□ 0.6
PALM3A6NDB9 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
PALM3A6NDB9 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
PALM3A6NDB9 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PALM3A6NDB9 MTHFR-217ENST00000641820 1569 ntBASIC18.81■□□□□ 0.6
PALM3A6NDB9 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PALM3A6NDB9 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PALM3A6NDB9 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC18.81■□□□□ 0.6
PALM3A6NDB9 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PALM3A6NDB9 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC18.81■□□□□ 0.6
PALM3A6NDB9 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PALM3A6NDB9 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PALM3A6NDB9 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC18.81■□□□□ 0.6
PALM3A6NDB9 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PALM3A6NDB9 AC006449.5-201ENST00000610658 2098 ntBASIC18.81■□□□□ 0.6
PALM3A6NDB9 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PALM3A6NDB9 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PALM3A6NDB9 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC18.81■□□□□ 0.6
PALM3A6NDB9 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PALM3A6NDB9 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC18.81■□□□□ 0.6
PALM3A6NDB9 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PALM3A6NDB9 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PALM3A6NDB9 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC18.8■□□□□ 0.6
PALM3A6NDB9 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PALM3A6NDB9 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC18.8■□□□□ 0.6
PALM3A6NDB9 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
PALM3A6NDB9 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
PALM3A6NDB9 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PALM3A6NDB9 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
PALM3A6NDB9 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PALM3A6NDB9 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PALM3A6NDB9 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
PALM3A6NDB9 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
PALM3A6NDB9 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PALM3A6NDB9 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC18.8■□□□□ 0.6
PALM3A6NDB9 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC18.8■□□□□ 0.6
PALM3A6NDB9 HMGN1P19-201ENST00000436976 333 ntBASIC18.8■□□□□ 0.6
PALM3A6NDB9 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PALM3A6NDB9 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC18.8■□□□□ 0.6
PALM3A6NDB9 HLA-V-204ENST00000476601 1289 ntBASIC18.8■□□□□ 0.6
PALM3A6NDB9 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC18.8■□□□□ 0.6
PALM3A6NDB9 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC18.8■□□□□ 0.6
PALM3A6NDB9 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC18.8■□□□□ 0.6
PALM3A6NDB9 DUT-210ENST00000559935 569 ntTSL 3 BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms