Protein–RNA interactions for Protein: A2RUR9

CCDC144A, Coiled-coil domain-containing protein 144A, humanhuman

Predictions only

Length 1,427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144AA2RUR9 KRT8P37-201ENST00000451609 1420 ntBASIC23.28■■□□□ 1.32
CCDC144AA2RUR9 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CCDC144AA2RUR9 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC23.28■■□□□ 1.32
CCDC144AA2RUR9 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC23.28■■□□□ 1.32
CCDC144AA2RUR9 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC23.28■■□□□ 1.32
CCDC144AA2RUR9 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC23.28■■□□□ 1.32
CCDC144AA2RUR9 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
CCDC144AA2RUR9 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC23.28■■□□□ 1.32
CCDC144AA2RUR9 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC23.28■■□□□ 1.32
CCDC144AA2RUR9 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC23.28■■□□□ 1.32
CCDC144AA2RUR9 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CCDC144AA2RUR9 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CCDC144AA2RUR9 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC23.27■■□□□ 1.32
CCDC144AA2RUR9 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CCDC144AA2RUR9 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
CCDC144AA2RUR9 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CCDC144AA2RUR9 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC23.27■■□□□ 1.32
CCDC144AA2RUR9 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC23.27■■□□□ 1.32
CCDC144AA2RUR9 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC23.27■■□□□ 1.32
CCDC144AA2RUR9 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
CCDC144AA2RUR9 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
CCDC144AA2RUR9 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC23.27■■□□□ 1.32
CCDC144AA2RUR9 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC23.27■■□□□ 1.32
CCDC144AA2RUR9 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC23.27■■□□□ 1.32
CCDC144AA2RUR9 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
CCDC144AA2RUR9 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
CCDC144AA2RUR9 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC23.27■■□□□ 1.32
CCDC144AA2RUR9 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC23.27■■□□□ 1.32
CCDC144AA2RUR9 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC23.27■■□□□ 1.32
CCDC144AA2RUR9 IGHV3-72-202ENST00000621503 303 ntBASIC23.27■■□□□ 1.32
CCDC144AA2RUR9 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC23.27■■□□□ 1.32
CCDC144AA2RUR9 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC23.27■■□□□ 1.32
CCDC144AA2RUR9 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC23.27■■□□□ 1.32
CCDC144AA2RUR9 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.32
CCDC144AA2RUR9 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC23.27■■□□□ 1.32
CCDC144AA2RUR9 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CCDC144AA2RUR9 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC23.27■■□□□ 1.32
CCDC144AA2RUR9 OS9-205ENST00000413095 1660 ntTSL 2 BASIC23.27■■□□□ 1.31
CCDC144AA2RUR9 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CCDC144AA2RUR9 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC23.26■■□□□ 1.31
CCDC144AA2RUR9 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
CCDC144AA2RUR9 AC098614.1-201ENST00000368528 745 ntBASIC23.26■■□□□ 1.31
CCDC144AA2RUR9 HLA-V-201ENST00000429037 534 ntBASIC23.26■■□□□ 1.31
CCDC144AA2RUR9 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC23.26■■□□□ 1.31
CCDC144AA2RUR9 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC23.26■■□□□ 1.31
CCDC144AA2RUR9 AL391069.4-201ENST00000609583 481 ntBASIC23.26■■□□□ 1.31
CCDC144AA2RUR9 AL008721.1-201ENST00000609964 604 ntBASIC23.26■■□□□ 1.31
CCDC144AA2RUR9 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC23.26■■□□□ 1.31
CCDC144AA2RUR9 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC23.26■■□□□ 1.31
CCDC144AA2RUR9 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC23.26■■□□□ 1.31
CCDC144AA2RUR9 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CCDC144AA2RUR9 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
CCDC144AA2RUR9 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CCDC144AA2RUR9 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
CCDC144AA2RUR9 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CCDC144AA2RUR9 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CCDC144AA2RUR9 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
CCDC144AA2RUR9 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CCDC144AA2RUR9 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC23.25■■□□□ 1.31
CCDC144AA2RUR9 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
CCDC144AA2RUR9 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
CCDC144AA2RUR9 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC23.25■■□□□ 1.31
CCDC144AA2RUR9 AP006294.1-201ENST00000415407 339 ntBASIC23.25■■□□□ 1.31
CCDC144AA2RUR9 KRT17P7-201ENST00000451704 1104 ntBASIC23.25■■□□□ 1.31
CCDC144AA2RUR9 RHOA-206ENST00000454011 889 ntTSL 2 BASIC23.25■■□□□ 1.31
CCDC144AA2RUR9 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC23.25■■□□□ 1.31
CCDC144AA2RUR9 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC23.25■■□□□ 1.31
CCDC144AA2RUR9 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC23.25■■□□□ 1.31
CCDC144AA2RUR9 NOP2-220ENST00000545915 630 ntTSL 2 BASIC23.25■■□□□ 1.31
CCDC144AA2RUR9 POLE2-203ENST00000553805 496 ntTSL 2 BASIC23.25■■□□□ 1.31
CCDC144AA2RUR9 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC23.25■■□□□ 1.31
CCDC144AA2RUR9 AL359881.2-201ENST00000602973 570 ntBASIC23.25■■□□□ 1.31
CCDC144AA2RUR9 LINC01115-203ENST00000606068 577 ntBASIC23.25■■□□□ 1.31
CCDC144AA2RUR9 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC23.25■■□□□ 1.31
CCDC144AA2RUR9 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC23.25■■□□□ 1.31
CCDC144AA2RUR9 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
CCDC144AA2RUR9 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
CCDC144AA2RUR9 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
CCDC144AA2RUR9 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
CCDC144AA2RUR9 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
CCDC144AA2RUR9 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC23.25■■□□□ 1.31
CCDC144AA2RUR9 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC23.25■■□□□ 1.31
CCDC144AA2RUR9 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
CCDC144AA2RUR9 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC23.25■■□□□ 1.31
CCDC144AA2RUR9 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CCDC144AA2RUR9 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
CCDC144AA2RUR9 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CCDC144AA2RUR9 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
CCDC144AA2RUR9 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC23.25■■□□□ 1.31
CCDC144AA2RUR9 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
CCDC144AA2RUR9 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
CCDC144AA2RUR9 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC23.25■■□□□ 1.31
CCDC144AA2RUR9 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC23.25■■□□□ 1.31
CCDC144AA2RUR9 MEP1AP4-201ENST00000423244 1087 ntBASIC23.25■■□□□ 1.31
CCDC144AA2RUR9 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC23.25■■□□□ 1.31
CCDC144AA2RUR9 PTPA-220ENST00000436883 532 ntTSL 4 BASIC23.25■■□□□ 1.31
CCDC144AA2RUR9 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC23.25■■□□□ 1.31
CCDC144AA2RUR9 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC23.25■■□□□ 1.31
CCDC144AA2RUR9 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
CCDC144AA2RUR9 RRP7BP-205ENST00000566851 833 ntBASIC23.25■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms