Protein–RNA interactions for Protein: A2A3K4

PTPDC1, Protein tyrosine phosphatase domain-containing protein 1, humanhuman

Predictions only

Length 754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1A2A3K4 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PTPDC1A2A3K4 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PTPDC1A2A3K4 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PTPDC1A2A3K4 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC19.26■□□□□ 0.67
PTPDC1A2A3K4 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PTPDC1A2A3K4 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC19.26■□□□□ 0.67
PTPDC1A2A3K4 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
PTPDC1A2A3K4 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PTPDC1A2A3K4 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
PTPDC1A2A3K4 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PTPDC1A2A3K4 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PTPDC1A2A3K4 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
PTPDC1A2A3K4 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PTPDC1A2A3K4 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC19.26■□□□□ 0.67
PTPDC1A2A3K4 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
PTPDC1A2A3K4 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
PTPDC1A2A3K4 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC19.26■□□□□ 0.67
PTPDC1A2A3K4 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
PTPDC1A2A3K4 HLA-J-203ENST00000494367 1087 ntBASIC19.26■□□□□ 0.67
PTPDC1A2A3K4 AC109322.1-201ENST00000524499 1264 ntBASIC19.26■□□□□ 0.67
PTPDC1A2A3K4 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PTPDC1A2A3K4 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PTPDC1A2A3K4 AC243562.1-201ENST00000560672 389 ntBASIC19.26■□□□□ 0.67
PTPDC1A2A3K4 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PTPDC1A2A3K4 MIR3909-201ENST00000579518 119 ntBASIC19.26■□□□□ 0.67
PTPDC1A2A3K4 AC021097.1-201ENST00000607902 574 ntBASIC19.26■□□□□ 0.67
PTPDC1A2A3K4 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC19.26■□□□□ 0.67
PTPDC1A2A3K4 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC19.26■□□□□ 0.67
PTPDC1A2A3K4 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PTPDC1A2A3K4 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PTPDC1A2A3K4 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC19.26■□□□□ 0.67
PTPDC1A2A3K4 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
PTPDC1A2A3K4 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC19.26■□□□□ 0.67
PTPDC1A2A3K4 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
PTPDC1A2A3K4 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PTPDC1A2A3K4 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
PTPDC1A2A3K4 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PTPDC1A2A3K4 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PTPDC1A2A3K4 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC19.25■□□□□ 0.67
PTPDC1A2A3K4 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PTPDC1A2A3K4 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC19.25■□□□□ 0.67
PTPDC1A2A3K4 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PTPDC1A2A3K4 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
PTPDC1A2A3K4 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PTPDC1A2A3K4 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PTPDC1A2A3K4 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC19.25■□□□□ 0.67
PTPDC1A2A3K4 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PTPDC1A2A3K4 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC19.25■□□□□ 0.67
PTPDC1A2A3K4 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC19.25■□□□□ 0.67
PTPDC1A2A3K4 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
PTPDC1A2A3K4 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC19.25■□□□□ 0.67
PTPDC1A2A3K4 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC19.25■□□□□ 0.67
PTPDC1A2A3K4 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
PTPDC1A2A3K4 CD99-202ENST00000381180 530 ntTSL 2 BASIC19.25■□□□□ 0.67
PTPDC1A2A3K4 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PTPDC1A2A3K4 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
PTPDC1A2A3K4 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC19.25■□□□□ 0.67
PTPDC1A2A3K4 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC19.25■□□□□ 0.67
PTPDC1A2A3K4 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
PTPDC1A2A3K4 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC19.25■□□□□ 0.67
PTPDC1A2A3K4 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PTPDC1A2A3K4 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PTPDC1A2A3K4 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC19.25■□□□□ 0.67
PTPDC1A2A3K4 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PTPDC1A2A3K4 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
PTPDC1A2A3K4 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC19.25■□□□□ 0.67
PTPDC1A2A3K4 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
PTPDC1A2A3K4 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PTPDC1A2A3K4 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PTPDC1A2A3K4 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PTPDC1A2A3K4 AKAP8P1-201ENST00000434743 1349 ntBASIC19.25■□□□□ 0.67
PTPDC1A2A3K4 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
PTPDC1A2A3K4 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC19.24■□□□□ 0.67
PTPDC1A2A3K4 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PTPDC1A2A3K4 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC19.24■□□□□ 0.67
PTPDC1A2A3K4 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PTPDC1A2A3K4 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
PTPDC1A2A3K4 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PTPDC1A2A3K4 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
PTPDC1A2A3K4 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC19.24■□□□□ 0.67
PTPDC1A2A3K4 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC19.24■□□□□ 0.67
PTPDC1A2A3K4 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PTPDC1A2A3K4 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC19.24■□□□□ 0.67
PTPDC1A2A3K4 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
PTPDC1A2A3K4 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC19.24■□□□□ 0.67
PTPDC1A2A3K4 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC19.24■□□□□ 0.67
PTPDC1A2A3K4 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC19.24■□□□□ 0.67
PTPDC1A2A3K4 AC025678.2-201ENST00000562061 970 ntBASIC19.24■□□□□ 0.67
PTPDC1A2A3K4 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC19.24■□□□□ 0.67
PTPDC1A2A3K4 LSM12-202ENST00000585388 942 ntTSL 3 BASIC19.24■□□□□ 0.67
PTPDC1A2A3K4 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PTPDC1A2A3K4 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC19.24■□□□□ 0.67
PTPDC1A2A3K4 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC19.24■□□□□ 0.67
PTPDC1A2A3K4 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PTPDC1A2A3K4 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
PTPDC1A2A3K4 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PTPDC1A2A3K4 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PTPDC1A2A3K4 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC19.24■□□□□ 0.67
PTPDC1A2A3K4 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
PTPDC1A2A3K4 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms