Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
TCRBV4S1A1TA0A5B7 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
TCRBV4S1A1TA0A5B7 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TCRBV4S1A1TA0A5B7 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC13.21□□□□□ -0.29
TCRBV4S1A1TA0A5B7 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TCRBV4S1A1TA0A5B7 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
TCRBV4S1A1TA0A5B7 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TCRBV4S1A1TA0A5B7 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC13.21□□□□□ -0.29
TCRBV4S1A1TA0A5B7 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TCRBV4S1A1TA0A5B7 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
TCRBV4S1A1TA0A5B7 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
TCRBV4S1A1TA0A5B7 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC13.21□□□□□ -0.29
TCRBV4S1A1TA0A5B7 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TCRBV4S1A1TA0A5B7 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
TCRBV4S1A1TA0A5B7 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
TCRBV4S1A1TA0A5B7 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TCRBV4S1A1TA0A5B7 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC13.21□□□□□ -0.29
TCRBV4S1A1TA0A5B7 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC13.21□□□□□ -0.29
TCRBV4S1A1TA0A5B7 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
TCRBV4S1A1TA0A5B7 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC13.21□□□□□ -0.29
TCRBV4S1A1TA0A5B7 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
TCRBV4S1A1TA0A5B7 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.29
TCRBV4S1A1TA0A5B7 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
TCRBV4S1A1TA0A5B7 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TCRBV4S1A1TA0A5B7 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
TCRBV4S1A1TA0A5B7 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
TCRBV4S1A1TA0A5B7 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
TCRBV4S1A1TA0A5B7 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC13.21□□□□□ -0.29
TCRBV4S1A1TA0A5B7 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TCRBV4S1A1TA0A5B7 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
TCRBV4S1A1TA0A5B7 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC13.21□□□□□ -0.29
TCRBV4S1A1TA0A5B7 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC13.21□□□□□ -0.29
TCRBV4S1A1TA0A5B7 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
TCRBV4S1A1TA0A5B7 AP002472.1-201ENST00000577490 586 ntBASIC13.21□□□□□ -0.29
TCRBV4S1A1TA0A5B7 AC013467.2-201ENST00000605472 835 ntBASIC13.21□□□□□ -0.29
TCRBV4S1A1TA0A5B7 BSG-214ENST00000614867 960 ntTSL 3 BASIC13.21□□□□□ -0.29
TCRBV4S1A1TA0A5B7 REXO1L3P-201ENST00000622202 1288 ntBASIC13.21□□□□□ -0.29
TCRBV4S1A1TA0A5B7 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC13.21□□□□□ -0.29
TCRBV4S1A1TA0A5B7 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC13.21□□□□□ -0.29
TCRBV4S1A1TA0A5B7 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC13.21□□□□□ -0.29
TCRBV4S1A1TA0A5B7 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC13.21□□□□□ -0.29
TCRBV4S1A1TA0A5B7 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC13.21□□□□□ -0.29
TCRBV4S1A1TA0A5B7 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
TCRBV4S1A1TA0A5B7 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
TCRBV4S1A1TA0A5B7 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
TCRBV4S1A1TA0A5B7 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
TCRBV4S1A1TA0A5B7 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
TCRBV4S1A1TA0A5B7 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC13.21□□□□□ -0.29
TCRBV4S1A1TA0A5B7 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC13.21□□□□□ -0.3
TCRBV4S1A1TA0A5B7 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
TCRBV4S1A1TA0A5B7 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
TCRBV4S1A1TA0A5B7 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
TCRBV4S1A1TA0A5B7 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC13.21□□□□□ -0.3
TCRBV4S1A1TA0A5B7 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.3
TCRBV4S1A1TA0A5B7 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
TCRBV4S1A1TA0A5B7 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC13.21□□□□□ -0.3
TCRBV4S1A1TA0A5B7 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
TCRBV4S1A1TA0A5B7 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
TCRBV4S1A1TA0A5B7 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.3
TCRBV4S1A1TA0A5B7 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
TCRBV4S1A1TA0A5B7 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
TCRBV4S1A1TA0A5B7 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
TCRBV4S1A1TA0A5B7 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TCRBV4S1A1TA0A5B7 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
TCRBV4S1A1TA0A5B7 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TCRBV4S1A1TA0A5B7 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TCRBV4S1A1TA0A5B7 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC13.2□□□□□ -0.3
TCRBV4S1A1TA0A5B7 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
TCRBV4S1A1TA0A5B7 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TCRBV4S1A1TA0A5B7 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TCRBV4S1A1TA0A5B7 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
TCRBV4S1A1TA0A5B7 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
TCRBV4S1A1TA0A5B7 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC13.2□□□□□ -0.3
TCRBV4S1A1TA0A5B7 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
TCRBV4S1A1TA0A5B7 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TCRBV4S1A1TA0A5B7 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TCRBV4S1A1TA0A5B7 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TCRBV4S1A1TA0A5B7 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC13.2□□□□□ -0.3
TCRBV4S1A1TA0A5B7 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC13.2□□□□□ -0.3
TCRBV4S1A1TA0A5B7 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC13.2□□□□□ -0.3
TCRBV4S1A1TA0A5B7 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
TCRBV4S1A1TA0A5B7 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TCRBV4S1A1TA0A5B7 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TCRBV4S1A1TA0A5B7 FALEC-201ENST00000416894 566 ntTSL 3 BASIC13.2□□□□□ -0.3
TCRBV4S1A1TA0A5B7 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC13.2□□□□□ -0.3
TCRBV4S1A1TA0A5B7 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC13.2□□□□□ -0.3
TCRBV4S1A1TA0A5B7 PON3-203ENST00000427422 894 ntTSL 3 BASIC13.2□□□□□ -0.3
TCRBV4S1A1TA0A5B7 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
TCRBV4S1A1TA0A5B7 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
TCRBV4S1A1TA0A5B7 AP000344.2-201ENST00000512987 629 ntBASIC13.2□□□□□ -0.3
TCRBV4S1A1TA0A5B7 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC13.2□□□□□ -0.3
TCRBV4S1A1TA0A5B7 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC13.2□□□□□ -0.3
TCRBV4S1A1TA0A5B7 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC13.2□□□□□ -0.3
TCRBV4S1A1TA0A5B7 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC13.2□□□□□ -0.3
TCRBV4S1A1TA0A5B7 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC13.2□□□□□ -0.3
TCRBV4S1A1TA0A5B7 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
TCRBV4S1A1TA0A5B7 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC13.2□□□□□ -0.3
TCRBV4S1A1TA0A5B7 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC13.2□□□□□ -0.3
TCRBV4S1A1TA0A5B7 AC004835.2-201ENST00000603762 682 ntBASIC13.2□□□□□ -0.3
TCRBV4S1A1TA0A5B7 AC092902.6-201ENST00000641783 218 ntBASIC13.2□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms