Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TCRBV3S1A0A5B6 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
TCRBV3S1A0A5B6 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TCRBV3S1A0A5B6 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TCRBV3S1A0A5B6 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TCRBV3S1A0A5B6 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TCRBV3S1A0A5B6 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
TCRBV3S1A0A5B6 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TCRBV3S1A0A5B6 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC15.34■□□□□ 0.05
TCRBV3S1A0A5B6 AC007191.1-201ENST00000623179 2995 ntBASIC15.34■□□□□ 0.05
TCRBV3S1A0A5B6 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TCRBV3S1A0A5B6 NSUN5P1-202ENST00000421140 1535 ntBASIC15.34■□□□□ 0.05
TCRBV3S1A0A5B6 NSUN5P2-203ENST00000457352 1529 ntBASIC15.34■□□□□ 0.05
TCRBV3S1A0A5B6 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
TCRBV3S1A0A5B6 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
TCRBV3S1A0A5B6 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC15.34■□□□□ 0.05
TCRBV3S1A0A5B6 U82695.1-201ENST00000635752 1889 ntBASIC15.34■□□□□ 0.05
TCRBV3S1A0A5B6 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC15.34■□□□□ 0.05
TCRBV3S1A0A5B6 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC15.34■□□□□ 0.05
TCRBV3S1A0A5B6 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
TCRBV3S1A0A5B6 ARMC10P1-201ENST00000313754 855 ntBASIC15.34■□□□□ 0.05
TCRBV3S1A0A5B6 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TCRBV3S1A0A5B6 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TCRBV3S1A0A5B6 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
TCRBV3S1A0A5B6 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
TCRBV3S1A0A5B6 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TCRBV3S1A0A5B6 AC026396.1-201ENST00000419388 421 ntBASIC15.34■□□□□ 0.05
TCRBV3S1A0A5B6 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TCRBV3S1A0A5B6 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC15.34■□□□□ 0.05
TCRBV3S1A0A5B6 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC15.34■□□□□ 0.05
TCRBV3S1A0A5B6 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC15.34■□□□□ 0.05
TCRBV3S1A0A5B6 AC087641.1-201ENST00000557561 1021 ntBASIC15.34■□□□□ 0.05
TCRBV3S1A0A5B6 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC15.34■□□□□ 0.05
TCRBV3S1A0A5B6 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC15.34■□□□□ 0.05
TCRBV3S1A0A5B6 GZMM-202ENST00000592501 941 ntTSL 3 BASIC15.34■□□□□ 0.05
TCRBV3S1A0A5B6 Z69720.1-201ENST00000601483 472 ntBASIC15.34■□□□□ 0.05
TCRBV3S1A0A5B6 AL139424.1-201ENST00000607572 797 ntBASIC15.34■□□□□ 0.05
TCRBV3S1A0A5B6 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC15.34■□□□□ 0.05
TCRBV3S1A0A5B6 AF228730.7-201ENST00000641842 219 ntBASIC15.34■□□□□ 0.05
TCRBV3S1A0A5B6 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TCRBV3S1A0A5B6 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC15.34■□□□□ 0.05
TCRBV3S1A0A5B6 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TCRBV3S1A0A5B6 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TCRBV3S1A0A5B6 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TCRBV3S1A0A5B6 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
TCRBV3S1A0A5B6 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
TCRBV3S1A0A5B6 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TCRBV3S1A0A5B6 AC091951.1-201ENST00000512854 2465 ntBASIC15.34■□□□□ 0.05
TCRBV3S1A0A5B6 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TCRBV3S1A0A5B6 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TCRBV3S1A0A5B6 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
TCRBV3S1A0A5B6 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC15.33■□□□□ 0.05
TCRBV3S1A0A5B6 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.05
TCRBV3S1A0A5B6 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
TCRBV3S1A0A5B6 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
TCRBV3S1A0A5B6 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC15.33■□□□□ 0.05
TCRBV3S1A0A5B6 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.05
TCRBV3S1A0A5B6 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC15.33■□□□□ 0.05
TCRBV3S1A0A5B6 PARN-202ENST00000420015 2360 ntTSL 2 BASIC15.33■□□□□ 0.04
TCRBV3S1A0A5B6 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC15.33■□□□□ 0.04
TCRBV3S1A0A5B6 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC15.33■□□□□ 0.04
TCRBV3S1A0A5B6 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
TCRBV3S1A0A5B6 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TCRBV3S1A0A5B6 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
TCRBV3S1A0A5B6 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
TCRBV3S1A0A5B6 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TCRBV3S1A0A5B6 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TCRBV3S1A0A5B6 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TCRBV3S1A0A5B6 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC15.33■□□□□ 0.04
TCRBV3S1A0A5B6 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC15.33■□□□□ 0.04
TCRBV3S1A0A5B6 LINC01023-201ENST00000606054 436 ntBASIC15.33■□□□□ 0.04
TCRBV3S1A0A5B6 AC012306.2-201ENST00000609350 630 ntBASIC15.33■□□□□ 0.04
TCRBV3S1A0A5B6 AP001350.2-201ENST00000625104 1094 ntBASIC15.33■□□□□ 0.04
TCRBV3S1A0A5B6 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
TCRBV3S1A0A5B6 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TCRBV3S1A0A5B6 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC15.33■□□□□ 0.04
TCRBV3S1A0A5B6 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
TCRBV3S1A0A5B6 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TCRBV3S1A0A5B6 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC15.33■□□□□ 0.04
TCRBV3S1A0A5B6 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
TCRBV3S1A0A5B6 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TCRBV3S1A0A5B6 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TCRBV3S1A0A5B6 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC15.33■□□□□ 0.04
TCRBV3S1A0A5B6 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC15.33■□□□□ 0.04
TCRBV3S1A0A5B6 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC15.33■□□□□ 0.04
TCRBV3S1A0A5B6 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TCRBV3S1A0A5B6 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC15.33■□□□□ 0.04
TCRBV3S1A0A5B6 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC15.33■□□□□ 0.04
TCRBV3S1A0A5B6 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
TCRBV3S1A0A5B6 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC15.33■□□□□ 0.04
TCRBV3S1A0A5B6 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TCRBV3S1A0A5B6 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
TCRBV3S1A0A5B6 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC15.33■□□□□ 0.04
TCRBV3S1A0A5B6 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
TCRBV3S1A0A5B6 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC15.33■□□□□ 0.04
TCRBV3S1A0A5B6 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TCRBV3S1A0A5B6 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TCRBV3S1A0A5B6 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
TCRBV3S1A0A5B6 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TCRBV3S1A0A5B6 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms