Protein–RNA interactions for Protein: A0A1B0GUT2

LINC00959, HCG1648656, isoform CRA_a, humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959A0A1B0GUT2 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
LINC00959A0A1B0GUT2 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC11.21□□□□□ -0.61
LINC00959A0A1B0GUT2 DPM2-202ENST00000373110 738 ntTSL 2 BASIC11.21□□□□□ -0.61
LINC00959A0A1B0GUT2 MIR648-201ENST00000385046 94 ntBASIC11.21□□□□□ -0.61
LINC00959A0A1B0GUT2 AC073621.1-201ENST00000392730 636 ntBASIC11.21□□□□□ -0.61
LINC00959A0A1B0GUT2 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
LINC00959A0A1B0GUT2 RPS2P1-201ENST00000434010 821 ntBASIC11.21□□□□□ -0.61
LINC00959A0A1B0GUT2 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC11.21□□□□□ -0.61
LINC00959A0A1B0GUT2 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC11.21□□□□□ -0.61
LINC00959A0A1B0GUT2 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC11.21□□□□□ -0.61
LINC00959A0A1B0GUT2 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
LINC00959A0A1B0GUT2 SKP2-204ENST00000508514 821 ntTSL 3 BASIC11.21□□□□□ -0.61
LINC00959A0A1B0GUT2 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC11.21□□□□□ -0.61
LINC00959A0A1B0GUT2 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC11.21□□□□□ -0.61
LINC00959A0A1B0GUT2 MMP17-203ENST00000535004 719 ntTSL 3 BASIC11.21□□□□□ -0.61
LINC00959A0A1B0GUT2 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.61
LINC00959A0A1B0GUT2 ETFA-208ENST00000559602 792 ntTSL 3 BASIC11.21□□□□□ -0.61
LINC00959A0A1B0GUT2 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
LINC00959A0A1B0GUT2 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC11.21□□□□□ -0.61
LINC00959A0A1B0GUT2 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC11.21□□□□□ -0.61
LINC00959A0A1B0GUT2 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
LINC00959A0A1B0GUT2 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
LINC00959A0A1B0GUT2 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
LINC00959A0A1B0GUT2 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
LINC00959A0A1B0GUT2 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
LINC00959A0A1B0GUT2 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.62
LINC00959A0A1B0GUT2 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
LINC00959A0A1B0GUT2 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC11.21□□□□□ -0.62
LINC00959A0A1B0GUT2 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
LINC00959A0A1B0GUT2 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC11.21□□□□□ -0.62
LINC00959A0A1B0GUT2 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
LINC00959A0A1B0GUT2 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC11.21□□□□□ -0.62
LINC00959A0A1B0GUT2 AP005117.1-202ENST00000581724 1908 ntBASIC11.21□□□□□ -0.62
LINC00959A0A1B0GUT2 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.62
LINC00959A0A1B0GUT2 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
LINC00959A0A1B0GUT2 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC11.21□□□□□ -0.62
LINC00959A0A1B0GUT2 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
LINC00959A0A1B0GUT2 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
LINC00959A0A1B0GUT2 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC11.21□□□□□ -0.62
LINC00959A0A1B0GUT2 AC005622.1-201ENST00000636801 1703 ntBASIC11.21□□□□□ -0.62
LINC00959A0A1B0GUT2 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC11.21□□□□□ -0.62
LINC00959A0A1B0GUT2 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
LINC00959A0A1B0GUT2 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC11.2□□□□□ -0.62
LINC00959A0A1B0GUT2 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC11.2□□□□□ -0.62
LINC00959A0A1B0GUT2 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC11.2□□□□□ -0.62
LINC00959A0A1B0GUT2 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
LINC00959A0A1B0GUT2 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
LINC00959A0A1B0GUT2 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
LINC00959A0A1B0GUT2 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
LINC00959A0A1B0GUT2 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC11.2□□□□□ -0.62
LINC00959A0A1B0GUT2 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
LINC00959A0A1B0GUT2 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
LINC00959A0A1B0GUT2 CYP51A1P2-201ENST00000419457 1499 ntBASIC11.2□□□□□ -0.62
LINC00959A0A1B0GUT2 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
LINC00959A0A1B0GUT2 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
LINC00959A0A1B0GUT2 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC11.2□□□□□ -0.62
LINC00959A0A1B0GUT2 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
LINC00959A0A1B0GUT2 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
LINC00959A0A1B0GUT2 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
LINC00959A0A1B0GUT2 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
LINC00959A0A1B0GUT2 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC11.2□□□□□ -0.62
LINC00959A0A1B0GUT2 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
LINC00959A0A1B0GUT2 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
LINC00959A0A1B0GUT2 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC11.2□□□□□ -0.62
LINC00959A0A1B0GUT2 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC11.2□□□□□ -0.62
LINC00959A0A1B0GUT2 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
LINC00959A0A1B0GUT2 INIP-202ENST00000374236 874 ntTSL 2 BASIC11.2□□□□□ -0.62
LINC00959A0A1B0GUT2 MRPL20P1-201ENST00000400819 433 ntBASIC11.2□□□□□ -0.62
LINC00959A0A1B0GUT2 MIR1224-201ENST00000408193 85 ntBASIC11.2□□□□□ -0.62
LINC00959A0A1B0GUT2 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC11.2□□□□□ -0.62
LINC00959A0A1B0GUT2 DUSP5P1-201ENST00000441325 1139 ntBASIC11.2□□□□□ -0.62
LINC00959A0A1B0GUT2 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC11.2□□□□□ -0.62
LINC00959A0A1B0GUT2 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC11.2□□□□□ -0.62
LINC00959A0A1B0GUT2 IGHV3-65-201ENST00000523210 341 ntBASIC11.2□□□□□ -0.62
LINC00959A0A1B0GUT2 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC11.2□□□□□ -0.62
LINC00959A0A1B0GUT2 PGM5P2-202ENST00000637225 1043 ntBASIC11.2□□□□□ -0.62
LINC00959A0A1B0GUT2 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC11.2□□□□□ -0.62
LINC00959A0A1B0GUT2 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
LINC00959A0A1B0GUT2 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC11.2□□□□□ -0.62
LINC00959A0A1B0GUT2 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
LINC00959A0A1B0GUT2 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
LINC00959A0A1B0GUT2 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
LINC00959A0A1B0GUT2 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC11.2□□□□□ -0.62
LINC00959A0A1B0GUT2 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC11.2□□□□□ -0.62
LINC00959A0A1B0GUT2 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
LINC00959A0A1B0GUT2 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
LINC00959A0A1B0GUT2 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC11.2□□□□□ -0.62
LINC00959A0A1B0GUT2 ACE-203ENST00000413513 2237 ntTSL 2 BASIC11.2□□□□□ -0.62
LINC00959A0A1B0GUT2 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
LINC00959A0A1B0GUT2 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
LINC00959A0A1B0GUT2 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
LINC00959A0A1B0GUT2 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
LINC00959A0A1B0GUT2 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
LINC00959A0A1B0GUT2 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC11.19□□□□□ -0.62
LINC00959A0A1B0GUT2 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC11.19□□□□□ -0.62
LINC00959A0A1B0GUT2 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC11.19□□□□□ -0.62
LINC00959A0A1B0GUT2 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
LINC00959A0A1B0GUT2 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC11.19□□□□□ -0.62
LINC00959A0A1B0GUT2 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC11.19□□□□□ -0.62
LINC00959A0A1B0GUT2 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC11.19□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 84.8 ms