Protein–RNA interactions for Protein: Q9Y6B7

AP4B1, AP-4 complex subunit beta-1, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4B1Q9Y6B7 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
AP4B1Q9Y6B7 AC003669.1-201ENST00000334569 611 ntBASIC15.82■□□□□ 0.12
AP4B1Q9Y6B7 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
AP4B1Q9Y6B7 HIST2H3DP1-201ENST00000401004 416 ntBASIC15.82■□□□□ 0.12
AP4B1Q9Y6B7 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC15.82■□□□□ 0.12
AP4B1Q9Y6B7 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
AP4B1Q9Y6B7 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
AP4B1Q9Y6B7 AC079781.3-201ENST00000449110 356 ntBASIC15.82■□□□□ 0.12
AP4B1Q9Y6B7 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC15.82■□□□□ 0.12
AP4B1Q9Y6B7 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC15.82■□□□□ 0.12
AP4B1Q9Y6B7 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC15.82■□□□□ 0.12
AP4B1Q9Y6B7 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC15.82■□□□□ 0.12
AP4B1Q9Y6B7 AC104692.2-201ENST00000603054 253 ntBASIC15.82■□□□□ 0.12
AP4B1Q9Y6B7 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC15.82■□□□□ 0.12
AP4B1Q9Y6B7 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC15.82■□□□□ 0.12
AP4B1Q9Y6B7 VPS51-217ENST00000639871 243 ntTSL 5 BASIC15.82■□□□□ 0.12
AP4B1Q9Y6B7 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
AP4B1Q9Y6B7 TUBB8P12-201ENST00000308911 1335 ntBASIC15.82■□□□□ 0.12
AP4B1Q9Y6B7 TUBB7P-202ENST00000428444 1305 ntBASIC15.82■□□□□ 0.12
AP4B1Q9Y6B7 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC15.82■□□□□ 0.12
AP4B1Q9Y6B7 TUBB8P7-204ENST00000567960 1332 ntBASIC15.82■□□□□ 0.12
AP4B1Q9Y6B7 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC15.82■□□□□ 0.12
AP4B1Q9Y6B7 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
AP4B1Q9Y6B7 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC15.82■□□□□ 0.12
AP4B1Q9Y6B7 FUT8-AS1-201ENST00000621019 1521 ntBASIC15.82■□□□□ 0.12
AP4B1Q9Y6B7 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
AP4B1Q9Y6B7 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
AP4B1Q9Y6B7 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
AP4B1Q9Y6B7 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
AP4B1Q9Y6B7 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
AP4B1Q9Y6B7 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC15.82■□□□□ 0.12
AP4B1Q9Y6B7 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC15.82■□□□□ 0.12
AP4B1Q9Y6B7 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC15.82■□□□□ 0.12
AP4B1Q9Y6B7 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC15.82■□□□□ 0.12
AP4B1Q9Y6B7 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
AP4B1Q9Y6B7 TCAF2P1-201ENST00000291129 2421 ntBASIC15.82■□□□□ 0.12
AP4B1Q9Y6B7 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
AP4B1Q9Y6B7 CICP13-201ENST00000422015 2789 ntBASIC15.81■□□□□ 0.12
AP4B1Q9Y6B7 AC138035.3-201ENST00000622706 2791 ntBASIC15.81■□□□□ 0.12
AP4B1Q9Y6B7 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC15.81■□□□□ 0.12
AP4B1Q9Y6B7 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
AP4B1Q9Y6B7 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC15.81■□□□□ 0.12
AP4B1Q9Y6B7 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
AP4B1Q9Y6B7 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
AP4B1Q9Y6B7 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC15.81■□□□□ 0.12
AP4B1Q9Y6B7 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
AP4B1Q9Y6B7 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
AP4B1Q9Y6B7 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
AP4B1Q9Y6B7 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
AP4B1Q9Y6B7 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
AP4B1Q9Y6B7 HLA-J-202ENST00000469281 1241 ntBASIC15.81■□□□□ 0.12
AP4B1Q9Y6B7 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC15.81■□□□□ 0.12
AP4B1Q9Y6B7 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
AP4B1Q9Y6B7 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
AP4B1Q9Y6B7 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC15.81■□□□□ 0.12
AP4B1Q9Y6B7 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC15.81■□□□□ 0.12
AP4B1Q9Y6B7 STK25P1-201ENST00000585406 838 ntBASIC15.81■□□□□ 0.12
AP4B1Q9Y6B7 CALM3-211ENST00000598871 561 ntTSL 4 BASIC15.81■□□□□ 0.12
AP4B1Q9Y6B7 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC15.81■□□□□ 0.12
AP4B1Q9Y6B7 AC023157.3-201ENST00000619086 2088 ntBASIC15.81■□□□□ 0.12
AP4B1Q9Y6B7 AC079776.2-201ENST00000641154 1609 ntBASIC15.81■□□□□ 0.12
AP4B1Q9Y6B7 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
AP4B1Q9Y6B7 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
AP4B1Q9Y6B7 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
AP4B1Q9Y6B7 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC15.81■□□□□ 0.12
AP4B1Q9Y6B7 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
AP4B1Q9Y6B7 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
AP4B1Q9Y6B7 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
AP4B1Q9Y6B7 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC15.8■□□□□ 0.12
AP4B1Q9Y6B7 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
AP4B1Q9Y6B7 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC15.8■□□□□ 0.12
AP4B1Q9Y6B7 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
AP4B1Q9Y6B7 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
AP4B1Q9Y6B7 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
AP4B1Q9Y6B7 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
AP4B1Q9Y6B7 SNX18-202ENST00000343017 3140 ntBASIC15.8■□□□□ 0.12
AP4B1Q9Y6B7 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
AP4B1Q9Y6B7 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
AP4B1Q9Y6B7 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC15.8■□□□□ 0.12
AP4B1Q9Y6B7 SIGLEC16-201ENST00000599858 1437 ntBASIC15.8■□□□□ 0.12
AP4B1Q9Y6B7 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
AP4B1Q9Y6B7 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
AP4B1Q9Y6B7 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
AP4B1Q9Y6B7 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC15.8■□□□□ 0.12
AP4B1Q9Y6B7 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
AP4B1Q9Y6B7 KLF4P1-201ENST00000412782 1185 ntBASIC15.8■□□□□ 0.12
AP4B1Q9Y6B7 SPDYE21P-201ENST00000413323 827 ntBASIC15.8■□□□□ 0.12
AP4B1Q9Y6B7 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
AP4B1Q9Y6B7 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
AP4B1Q9Y6B7 AP002469.2-201ENST00000531724 424 ntBASIC15.8■□□□□ 0.12
AP4B1Q9Y6B7 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC15.8■□□□□ 0.12
AP4B1Q9Y6B7 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
AP4B1Q9Y6B7 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC15.8■□□□□ 0.12
AP4B1Q9Y6B7 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
AP4B1Q9Y6B7 AC073592.4-201ENST00000623827 446 ntBASIC15.8■□□□□ 0.12
AP4B1Q9Y6B7 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
AP4B1Q9Y6B7 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC15.8■□□□□ 0.12
AP4B1Q9Y6B7 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC15.8■□□□□ 0.12
AP4B1Q9Y6B7 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
AP4B1Q9Y6B7 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 916.7 ms