Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
RAI2Q9Y5P3 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC16.57■□□□□ 0.24
RAI2Q9Y5P3 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC16.57■□□□□ 0.24
RAI2Q9Y5P3 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RAI2Q9Y5P3 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC16.57■□□□□ 0.24
RAI2Q9Y5P3 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC16.57■□□□□ 0.24
RAI2Q9Y5P3 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
RAI2Q9Y5P3 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
RAI2Q9Y5P3 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC16.57■□□□□ 0.24
RAI2Q9Y5P3 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RAI2Q9Y5P3 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC16.57■□□□□ 0.24
RAI2Q9Y5P3 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RAI2Q9Y5P3 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
RAI2Q9Y5P3 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC16.57■□□□□ 0.24
RAI2Q9Y5P3 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC16.57■□□□□ 0.24
RAI2Q9Y5P3 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RAI2Q9Y5P3 COPE-202ENST00000349893 948 ntTSL 2 BASIC16.57■□□□□ 0.24
RAI2Q9Y5P3 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RAI2Q9Y5P3 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RAI2Q9Y5P3 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RAI2Q9Y5P3 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC16.57■□□□□ 0.24
RAI2Q9Y5P3 HLA-DRB6-201ENST00000411500 1235 ntBASIC16.57■□□□□ 0.24
RAI2Q9Y5P3 AC015922.1-201ENST00000421102 1152 ntBASIC16.57■□□□□ 0.24
RAI2Q9Y5P3 AC005237.2-201ENST00000434368 219 ntBASIC16.57■□□□□ 0.24
RAI2Q9Y5P3 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
RAI2Q9Y5P3 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC16.57■□□□□ 0.24
RAI2Q9Y5P3 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RAI2Q9Y5P3 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RAI2Q9Y5P3 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC16.57■□□□□ 0.24
RAI2Q9Y5P3 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RAI2Q9Y5P3 AP000842.3-202ENST00000569238 1080 ntBASIC16.57■□□□□ 0.24
RAI2Q9Y5P3 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
RAI2Q9Y5P3 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RAI2Q9Y5P3 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC16.57■□□□□ 0.24
RAI2Q9Y5P3 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
RAI2Q9Y5P3 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RAI2Q9Y5P3 WT1-209ENST00000530998 2421 ntTSL 2 BASIC16.57■□□□□ 0.24
RAI2Q9Y5P3 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RAI2Q9Y5P3 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC16.57■□□□□ 0.24
RAI2Q9Y5P3 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
RAI2Q9Y5P3 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RAI2Q9Y5P3 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
RAI2Q9Y5P3 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RAI2Q9Y5P3 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
RAI2Q9Y5P3 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC16.56■□□□□ 0.24
RAI2Q9Y5P3 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RAI2Q9Y5P3 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC16.56■□□□□ 0.24
RAI2Q9Y5P3 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC16.56■□□□□ 0.24
RAI2Q9Y5P3 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC16.56■□□□□ 0.24
RAI2Q9Y5P3 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RAI2Q9Y5P3 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RAI2Q9Y5P3 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RAI2Q9Y5P3 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC16.56■□□□□ 0.24
RAI2Q9Y5P3 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
RAI2Q9Y5P3 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC16.56■□□□□ 0.24
RAI2Q9Y5P3 GOLGA6L17P-202ENST00000614358 1398 ntBASIC16.56■□□□□ 0.24
RAI2Q9Y5P3 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RAI2Q9Y5P3 RELA-227ENST00000615805 2236 ntTSL 5 BASIC16.56■□□□□ 0.24
RAI2Q9Y5P3 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
RAI2Q9Y5P3 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RAI2Q9Y5P3 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RAI2Q9Y5P3 MIR346-201ENST00000362234 95 ntBASIC16.56■□□□□ 0.24
RAI2Q9Y5P3 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
RAI2Q9Y5P3 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RAI2Q9Y5P3 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC16.56■□□□□ 0.24
RAI2Q9Y5P3 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC16.56■□□□□ 0.24
RAI2Q9Y5P3 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC16.56■□□□□ 0.24
RAI2Q9Y5P3 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC16.56■□□□□ 0.24
RAI2Q9Y5P3 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC16.56■□□□□ 0.24
RAI2Q9Y5P3 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC16.56■□□□□ 0.24
RAI2Q9Y5P3 AC093520.2-201ENST00000561830 333 ntBASIC16.56■□□□□ 0.24
RAI2Q9Y5P3 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC16.56■□□□□ 0.24
RAI2Q9Y5P3 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC16.56■□□□□ 0.24
RAI2Q9Y5P3 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC16.56■□□□□ 0.24
RAI2Q9Y5P3 LSM12-202ENST00000585388 942 ntTSL 3 BASIC16.56■□□□□ 0.24
RAI2Q9Y5P3 FHL2-212ENST00000607522 759 ntTSL 2 BASIC16.56■□□□□ 0.24
RAI2Q9Y5P3 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC16.56■□□□□ 0.24
RAI2Q9Y5P3 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC16.56■□□□□ 0.24
RAI2Q9Y5P3 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RAI2Q9Y5P3 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
RAI2Q9Y5P3 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC16.56■□□□□ 0.24
RAI2Q9Y5P3 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RAI2Q9Y5P3 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RAI2Q9Y5P3 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC16.56■□□□□ 0.24
RAI2Q9Y5P3 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
RAI2Q9Y5P3 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RAI2Q9Y5P3 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC16.56■□□□□ 0.24
RAI2Q9Y5P3 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC16.56■□□□□ 0.24
RAI2Q9Y5P3 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC16.56■□□□□ 0.24
RAI2Q9Y5P3 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RAI2Q9Y5P3 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
RAI2Q9Y5P3 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
RAI2Q9Y5P3 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
RAI2Q9Y5P3 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC16.55■□□□□ 0.24
RAI2Q9Y5P3 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RAI2Q9Y5P3 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
RAI2Q9Y5P3 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RAI2Q9Y5P3 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
RAI2Q9Y5P3 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
RAI2Q9Y5P3 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms