Protein–RNA interactions for Protein: Q9Y548

YIPF1, Protein YIPF1, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF1Q9Y548 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
YIPF1Q9Y548 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
YIPF1Q9Y548 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC17■□□□□ 0.31
YIPF1Q9Y548 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC17■□□□□ 0.31
YIPF1Q9Y548 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC17■□□□□ 0.31
YIPF1Q9Y548 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
YIPF1Q9Y548 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
YIPF1Q9Y548 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
YIPF1Q9Y548 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC17■□□□□ 0.31
YIPF1Q9Y548 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC17■□□□□ 0.31
YIPF1Q9Y548 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
YIPF1Q9Y548 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
YIPF1Q9Y548 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
YIPF1Q9Y548 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
YIPF1Q9Y548 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
YIPF1Q9Y548 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC17■□□□□ 0.31
YIPF1Q9Y548 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
YIPF1Q9Y548 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC17■□□□□ 0.31
YIPF1Q9Y548 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC17■□□□□ 0.31
YIPF1Q9Y548 AC093004.1-201ENST00000508850 424 ntBASIC17■□□□□ 0.31
YIPF1Q9Y548 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC17■□□□□ 0.31
YIPF1Q9Y548 CR383656.12-201ENST00000549567 513 ntBASIC17■□□□□ 0.31
YIPF1Q9Y548 ARL16-202ENST00000570561 768 ntTSL 2 BASIC17■□□□□ 0.31
YIPF1Q9Y548 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC17■□□□□ 0.31
YIPF1Q9Y548 AL109936.8-201ENST00000641772 604 ntBASIC17■□□□□ 0.31
YIPF1Q9Y548 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
YIPF1Q9Y548 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC17■□□□□ 0.31
YIPF1Q9Y548 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC17■□□□□ 0.31
YIPF1Q9Y548 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC16.99■□□□□ 0.31
YIPF1Q9Y548 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
YIPF1Q9Y548 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
YIPF1Q9Y548 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
YIPF1Q9Y548 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
YIPF1Q9Y548 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
YIPF1Q9Y548 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
YIPF1Q9Y548 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
YIPF1Q9Y548 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
YIPF1Q9Y548 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
YIPF1Q9Y548 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
YIPF1Q9Y548 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
YIPF1Q9Y548 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
YIPF1Q9Y548 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
YIPF1Q9Y548 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
YIPF1Q9Y548 OSM-203ENST00000403463 464 ntTSL 3 BASIC16.99■□□□□ 0.31
YIPF1Q9Y548 AC244107.1-201ENST00000442033 332 ntBASIC16.99■□□□□ 0.31
YIPF1Q9Y548 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC16.99■□□□□ 0.31
YIPF1Q9Y548 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC16.99■□□□□ 0.31
YIPF1Q9Y548 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC16.99■□□□□ 0.31
YIPF1Q9Y548 5S_rRNA.22-201ENST00000614916 106 ntBASIC16.99■□□□□ 0.31
YIPF1Q9Y548 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC16.99■□□□□ 0.31
YIPF1Q9Y548 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC16.99■□□□□ 0.31
YIPF1Q9Y548 AC004461.2-201ENST00000629517 803 ntBASIC16.99■□□□□ 0.31
YIPF1Q9Y548 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
YIPF1Q9Y548 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
YIPF1Q9Y548 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
YIPF1Q9Y548 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
YIPF1Q9Y548 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
YIPF1Q9Y548 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
YIPF1Q9Y548 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
YIPF1Q9Y548 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
YIPF1Q9Y548 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC16.99■□□□□ 0.31
YIPF1Q9Y548 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
YIPF1Q9Y548 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC16.98■□□□□ 0.31
YIPF1Q9Y548 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
YIPF1Q9Y548 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC16.98■□□□□ 0.31
YIPF1Q9Y548 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC16.98■□□□□ 0.31
YIPF1Q9Y548 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
YIPF1Q9Y548 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
YIPF1Q9Y548 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC16.98■□□□□ 0.31
YIPF1Q9Y548 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC16.98■□□□□ 0.31
YIPF1Q9Y548 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC16.98■□□□□ 0.31
YIPF1Q9Y548 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC16.98■□□□□ 0.31
YIPF1Q9Y548 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC16.98■□□□□ 0.31
YIPF1Q9Y548 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC16.98■□□□□ 0.31
YIPF1Q9Y548 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
YIPF1Q9Y548 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC16.98■□□□□ 0.31
YIPF1Q9Y548 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC16.98■□□□□ 0.31
YIPF1Q9Y548 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC16.98■□□□□ 0.31
YIPF1Q9Y548 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC16.98■□□□□ 0.31
YIPF1Q9Y548 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC16.98■□□□□ 0.31
YIPF1Q9Y548 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC16.98■□□□□ 0.31
YIPF1Q9Y548 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
YIPF1Q9Y548 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC16.98■□□□□ 0.31
YIPF1Q9Y548 SRD5A3P1-201ENST00000603021 949 ntBASIC16.98■□□□□ 0.31
YIPF1Q9Y548 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC16.98■□□□□ 0.31
YIPF1Q9Y548 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
YIPF1Q9Y548 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
YIPF1Q9Y548 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC16.98■□□□□ 0.31
YIPF1Q9Y548 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC16.98■□□□□ 0.31
YIPF1Q9Y548 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
YIPF1Q9Y548 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
YIPF1Q9Y548 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC16.98■□□□□ 0.31
YIPF1Q9Y548 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
YIPF1Q9Y548 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
YIPF1Q9Y548 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
YIPF1Q9Y548 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
YIPF1Q9Y548 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
YIPF1Q9Y548 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC16.98■□□□□ 0.31
YIPF1Q9Y548 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
YIPF1Q9Y548 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC16.98■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 68.7 ms