Protein–RNA interactions for Protein: Q9Y446

PKP3, Plakophilin-3, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3Q9Y446 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
PKP3Q9Y446 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
PKP3Q9Y446 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC16.47■□□□□ 0.23
PKP3Q9Y446 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PKP3Q9Y446 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PKP3Q9Y446 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PKP3Q9Y446 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PKP3Q9Y446 TFAMP1-201ENST00000412727 736 ntBASIC16.47■□□□□ 0.23
PKP3Q9Y446 ALG1L5P-201ENST00000482043 771 ntBASIC16.47■□□□□ 0.23
PKP3Q9Y446 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC16.47■□□□□ 0.23
PKP3Q9Y446 AC092865.5-201ENST00000545435 363 ntBASIC16.47■□□□□ 0.23
PKP3Q9Y446 AL135744.1-201ENST00000565098 629 ntBASIC16.47■□□□□ 0.23
PKP3Q9Y446 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
PKP3Q9Y446 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PKP3Q9Y446 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC16.47■□□□□ 0.23
PKP3Q9Y446 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
PKP3Q9Y446 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
PKP3Q9Y446 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
PKP3Q9Y446 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC16.47■□□□□ 0.23
PKP3Q9Y446 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC16.47■□□□□ 0.23
PKP3Q9Y446 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PKP3Q9Y446 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PKP3Q9Y446 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PKP3Q9Y446 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PKP3Q9Y446 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
PKP3Q9Y446 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PKP3Q9Y446 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PKP3Q9Y446 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC16.47■□□□□ 0.23
PKP3Q9Y446 AC092364.2-201ENST00000596710 2692 ntBASIC16.47■□□□□ 0.23
PKP3Q9Y446 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC16.47■□□□□ 0.23
PKP3Q9Y446 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PKP3Q9Y446 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC16.47■□□□□ 0.23
PKP3Q9Y446 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC16.46■□□□□ 0.23
PKP3Q9Y446 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PKP3Q9Y446 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PKP3Q9Y446 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC16.46■□□□□ 0.23
PKP3Q9Y446 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PKP3Q9Y446 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC16.46■□□□□ 0.23
PKP3Q9Y446 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
PKP3Q9Y446 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
PKP3Q9Y446 U82695.1-201ENST00000635752 1889 ntBASIC16.46■□□□□ 0.23
PKP3Q9Y446 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PKP3Q9Y446 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC16.46■□□□□ 0.23
PKP3Q9Y446 AC006449.5-201ENST00000610658 2098 ntBASIC16.46■□□□□ 0.23
PKP3Q9Y446 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PKP3Q9Y446 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PKP3Q9Y446 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PKP3Q9Y446 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PKP3Q9Y446 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PKP3Q9Y446 CD82-202ENST00000342935 967 ntTSL 5 BASIC16.46■□□□□ 0.23
PKP3Q9Y446 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC16.46■□□□□ 0.23
PKP3Q9Y446 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
PKP3Q9Y446 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC16.46■□□□□ 0.23
PKP3Q9Y446 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC16.46■□□□□ 0.23
PKP3Q9Y446 SPDYE11-202ENST00000450699 704 ntBASIC16.46■□□□□ 0.23
PKP3Q9Y446 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
PKP3Q9Y446 PRYP6-201ENST00000514804 343 ntBASIC16.46■□□□□ 0.23
PKP3Q9Y446 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
PKP3Q9Y446 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
PKP3Q9Y446 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
PKP3Q9Y446 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC16.46■□□□□ 0.23
PKP3Q9Y446 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC16.46■□□□□ 0.23
PKP3Q9Y446 SPDYE9P-201ENST00000570642 692 ntBASIC16.46■□□□□ 0.23
PKP3Q9Y446 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC16.46■□□□□ 0.23
PKP3Q9Y446 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC16.46■□□□□ 0.23
PKP3Q9Y446 AC010327.4-202ENST00000591484 748 ntBASIC16.46■□□□□ 0.23
PKP3Q9Y446 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC16.46■□□□□ 0.23
PKP3Q9Y446 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC16.46■□□□□ 0.23
PKP3Q9Y446 SPDYE10P-202ENST00000612005 668 ntBASIC16.46■□□□□ 0.23
PKP3Q9Y446 SPDYE8P-202ENST00000612377 668 ntBASIC16.46■□□□□ 0.23
PKP3Q9Y446 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
PKP3Q9Y446 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
PKP3Q9Y446 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PKP3Q9Y446 ELL2P1-201ENST00000413990 1906 ntBASIC16.46■□□□□ 0.23
PKP3Q9Y446 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PKP3Q9Y446 AC046158.3-201ENST00000624947 2558 ntBASIC16.46■□□□□ 0.23
PKP3Q9Y446 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC16.46■□□□□ 0.23
PKP3Q9Y446 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PKP3Q9Y446 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC16.46■□□□□ 0.23
PKP3Q9Y446 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC16.46■□□□□ 0.23
PKP3Q9Y446 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
PKP3Q9Y446 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PKP3Q9Y446 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC16.46■□□□□ 0.23
PKP3Q9Y446 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
PKP3Q9Y446 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC16.46■□□□□ 0.23
PKP3Q9Y446 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.22
PKP3Q9Y446 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC16.46■□□□□ 0.22
PKP3Q9Y446 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
PKP3Q9Y446 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
PKP3Q9Y446 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC16.46■□□□□ 0.22
PKP3Q9Y446 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC16.46■□□□□ 0.22
PKP3Q9Y446 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
PKP3Q9Y446 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.22
PKP3Q9Y446 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
PKP3Q9Y446 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
PKP3Q9Y446 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC16.45■□□□□ 0.22
PKP3Q9Y446 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PKP3Q9Y446 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC16.45■□□□□ 0.22
PKP3Q9Y446 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
PKP3Q9Y446 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms