Protein–RNA interactions for Protein: Q9Y2A7

NCKAP1, Nck-associated protein 1, humanhuman

Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1Q9Y2A7 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NCKAP1Q9Y2A7 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
NCKAP1Q9Y2A7 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NCKAP1Q9Y2A7 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NCKAP1Q9Y2A7 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NCKAP1Q9Y2A7 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NCKAP1Q9Y2A7 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC16.39■□□□□ 0.21
NCKAP1Q9Y2A7 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
NCKAP1Q9Y2A7 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC16.39■□□□□ 0.21
NCKAP1Q9Y2A7 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
NCKAP1Q9Y2A7 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
NCKAP1Q9Y2A7 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
NCKAP1Q9Y2A7 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
NCKAP1Q9Y2A7 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NCKAP1Q9Y2A7 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
NCKAP1Q9Y2A7 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NCKAP1Q9Y2A7 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NCKAP1Q9Y2A7 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC16.39■□□□□ 0.21
NCKAP1Q9Y2A7 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC16.39■□□□□ 0.21
NCKAP1Q9Y2A7 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC16.39■□□□□ 0.21
NCKAP1Q9Y2A7 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NCKAP1Q9Y2A7 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NCKAP1Q9Y2A7 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC16.39■□□□□ 0.21
NCKAP1Q9Y2A7 RBM7-207ENST00000544582 692 ntTSL 3 BASIC16.39■□□□□ 0.21
NCKAP1Q9Y2A7 AL079307.3-201ENST00000556114 283 ntBASIC16.39■□□□□ 0.21
NCKAP1Q9Y2A7 NAA38-207ENST00000576861 556 ntTSL 3 BASIC16.39■□□□□ 0.21
NCKAP1Q9Y2A7 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC16.39■□□□□ 0.21
NCKAP1Q9Y2A7 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NCKAP1Q9Y2A7 AC060834.1-201ENST00000443027 2032 ntBASIC16.39■□□□□ 0.21
NCKAP1Q9Y2A7 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC16.39■□□□□ 0.21
NCKAP1Q9Y2A7 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NCKAP1Q9Y2A7 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC16.39■□□□□ 0.21
NCKAP1Q9Y2A7 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
NCKAP1Q9Y2A7 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
NCKAP1Q9Y2A7 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
NCKAP1Q9Y2A7 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
NCKAP1Q9Y2A7 AC084018.2-201ENST00000613093 2607 ntBASIC16.39■□□□□ 0.21
NCKAP1Q9Y2A7 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC16.39■□□□□ 0.21
NCKAP1Q9Y2A7 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC16.39■□□□□ 0.21
NCKAP1Q9Y2A7 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC16.39■□□□□ 0.21
NCKAP1Q9Y2A7 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NCKAP1Q9Y2A7 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC16.39■□□□□ 0.21
NCKAP1Q9Y2A7 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NCKAP1Q9Y2A7 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NCKAP1Q9Y2A7 AC006538.1-201ENST00000567905 1585 ntBASIC16.38■□□□□ 0.21
NCKAP1Q9Y2A7 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
NCKAP1Q9Y2A7 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NCKAP1Q9Y2A7 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NCKAP1Q9Y2A7 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NCKAP1Q9Y2A7 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
NCKAP1Q9Y2A7 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
NCKAP1Q9Y2A7 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
NCKAP1Q9Y2A7 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC16.38■□□□□ 0.21
NCKAP1Q9Y2A7 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
NCKAP1Q9Y2A7 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC16.38■□□□□ 0.21
NCKAP1Q9Y2A7 AL031731.1-201ENST00000642131 2094 ntBASIC16.38■□□□□ 0.21
NCKAP1Q9Y2A7 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
NCKAP1Q9Y2A7 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC16.38■□□□□ 0.21
NCKAP1Q9Y2A7 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
NCKAP1Q9Y2A7 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NCKAP1Q9Y2A7 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
NCKAP1Q9Y2A7 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
NCKAP1Q9Y2A7 CRB3P1-201ENST00000449338 276 ntBASIC16.38■□□□□ 0.21
NCKAP1Q9Y2A7 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
NCKAP1Q9Y2A7 STOM-203ENST00000538954 1257 ntTSL 5 BASIC16.38■□□□□ 0.21
NCKAP1Q9Y2A7 AC005225.4-201ENST00000557330 545 ntBASIC16.38■□□□□ 0.21
NCKAP1Q9Y2A7 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC16.38■□□□□ 0.21
NCKAP1Q9Y2A7 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
NCKAP1Q9Y2A7 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC16.38■□□□□ 0.21
NCKAP1Q9Y2A7 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC16.38■□□□□ 0.21
NCKAP1Q9Y2A7 AL035252.4-201ENST00000624174 288 ntBASIC16.38■□□□□ 0.21
NCKAP1Q9Y2A7 BANP-227ENST00000626016 2144 ntTSL 2 BASIC16.38■□□□□ 0.21
NCKAP1Q9Y2A7 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
NCKAP1Q9Y2A7 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
NCKAP1Q9Y2A7 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
NCKAP1Q9Y2A7 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NCKAP1Q9Y2A7 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NCKAP1Q9Y2A7 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NCKAP1Q9Y2A7 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
NCKAP1Q9Y2A7 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NCKAP1Q9Y2A7 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NCKAP1Q9Y2A7 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
NCKAP1Q9Y2A7 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
NCKAP1Q9Y2A7 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NCKAP1Q9Y2A7 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
NCKAP1Q9Y2A7 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
NCKAP1Q9Y2A7 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
NCKAP1Q9Y2A7 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
NCKAP1Q9Y2A7 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
NCKAP1Q9Y2A7 CEP83-AS1-201ENST00000623122 2482 ntBASIC16.37■□□□□ 0.21
NCKAP1Q9Y2A7 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC16.37■□□□□ 0.21
NCKAP1Q9Y2A7 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC16.37■□□□□ 0.21
NCKAP1Q9Y2A7 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
NCKAP1Q9Y2A7 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
NCKAP1Q9Y2A7 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
NCKAP1Q9Y2A7 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC16.37■□□□□ 0.21
NCKAP1Q9Y2A7 RBM39-205ENST00000397370 612 ntTSL 2 BASIC16.37■□□□□ 0.21
NCKAP1Q9Y2A7 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC16.37■□□□□ 0.21
NCKAP1Q9Y2A7 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
NCKAP1Q9Y2A7 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms