Protein–RNA interactions for Protein: Q9Y282

ERGIC3, Endoplasmic reticulum-Golgi intermediate compartment protein 3, humanhuman

Predictions only

Length 383 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3Q9Y282 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
ERGIC3Q9Y282 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC15.04■□□□□ -0
ERGIC3Q9Y282 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC15.04■□□□□ -0
ERGIC3Q9Y282 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC15.04■□□□□ -0
ERGIC3Q9Y282 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
ERGIC3Q9Y282 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
ERGIC3Q9Y282 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
ERGIC3Q9Y282 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
ERGIC3Q9Y282 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC15.03■□□□□ -0
ERGIC3Q9Y282 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
ERGIC3Q9Y282 OR2I1P-210ENST00000642037 4691 ntBASIC15.03■□□□□ -0
ERGIC3Q9Y282 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC15.03■□□□□ -0
ERGIC3Q9Y282 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC15.03■□□□□ -0
ERGIC3Q9Y282 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC15.03■□□□□ -0
ERGIC3Q9Y282 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC15.03■□□□□ -0
ERGIC3Q9Y282 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
ERGIC3Q9Y282 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC15.03■□□□□ -0
ERGIC3Q9Y282 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
ERGIC3Q9Y282 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
ERGIC3Q9Y282 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
ERGIC3Q9Y282 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
ERGIC3Q9Y282 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
ERGIC3Q9Y282 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
ERGIC3Q9Y282 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC15.03■□□□□ -0
ERGIC3Q9Y282 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC15.03■□□□□ -0
ERGIC3Q9Y282 ACTG1P4-201ENST00000425123 1122 ntBASIC15.03■□□□□ -0
ERGIC3Q9Y282 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC15.03■□□□□ -0
ERGIC3Q9Y282 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC15.03■□□□□ -0
ERGIC3Q9Y282 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC15.03■□□□□ -0
ERGIC3Q9Y282 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
ERGIC3Q9Y282 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC15.03■□□□□ -0
ERGIC3Q9Y282 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
ERGIC3Q9Y282 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
ERGIC3Q9Y282 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
ERGIC3Q9Y282 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
ERGIC3Q9Y282 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC15.03■□□□□ -0
ERGIC3Q9Y282 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
ERGIC3Q9Y282 PRAL-201ENST00000624952 3286 ntBASIC15.03■□□□□ -0
ERGIC3Q9Y282 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
ERGIC3Q9Y282 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC15.03■□□□□ -0
ERGIC3Q9Y282 AC097376.2-205ENST00000610159 5334 ntBASIC15.03■□□□□ -0
ERGIC3Q9Y282 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC15.03■□□□□ -0
ERGIC3Q9Y282 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC15.03■□□□□ -0
ERGIC3Q9Y282 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
ERGIC3Q9Y282 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
ERGIC3Q9Y282 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
ERGIC3Q9Y282 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
ERGIC3Q9Y282 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC15.03■□□□□ -0
ERGIC3Q9Y282 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC15.02■□□□□ -0
ERGIC3Q9Y282 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC15.02■□□□□ -0
ERGIC3Q9Y282 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
ERGIC3Q9Y282 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC15.02■□□□□ -0
ERGIC3Q9Y282 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC15.02■□□□□ -0
ERGIC3Q9Y282 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC15.02■□□□□ -0
ERGIC3Q9Y282 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC15.02■□□□□ -0
ERGIC3Q9Y282 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
ERGIC3Q9Y282 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC15.02■□□□□ -0
ERGIC3Q9Y282 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
ERGIC3Q9Y282 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
ERGIC3Q9Y282 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC15.02■□□□□ -0
ERGIC3Q9Y282 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC15.02■□□□□ -0
ERGIC3Q9Y282 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
ERGIC3Q9Y282 UBC-206ENST00000538617 1303 ntTSL 5 BASIC15.02■□□□□ -0
ERGIC3Q9Y282 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
ERGIC3Q9Y282 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
ERGIC3Q9Y282 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
ERGIC3Q9Y282 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
ERGIC3Q9Y282 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC15.02■□□□□ -0
ERGIC3Q9Y282 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
ERGIC3Q9Y282 FGF14-AS2-201ENST00000606448 1074 ntBASIC15.02■□□□□ -0
ERGIC3Q9Y282 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC15.02■□□□□ -0
ERGIC3Q9Y282 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
ERGIC3Q9Y282 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
ERGIC3Q9Y282 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
ERGIC3Q9Y282 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC15.02□□□□□ -0.01
ERGIC3Q9Y282 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC15.02□□□□□ -0.01
ERGIC3Q9Y282 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
ERGIC3Q9Y282 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC15.02□□□□□ -0.01
ERGIC3Q9Y282 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
ERGIC3Q9Y282 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
ERGIC3Q9Y282 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
ERGIC3Q9Y282 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC15.02□□□□□ -0.01
ERGIC3Q9Y282 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC15.02□□□□□ -0.01
ERGIC3Q9Y282 PPP1R26P4-201ENST00000619065 3527 ntBASIC15.02□□□□□ -0.01
ERGIC3Q9Y282 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
ERGIC3Q9Y282 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC15.02□□□□□ -0.01
ERGIC3Q9Y282 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC15.02□□□□□ -0.01
ERGIC3Q9Y282 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC15.02□□□□□ -0.01
ERGIC3Q9Y282 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC15.02□□□□□ -0.01
ERGIC3Q9Y282 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
ERGIC3Q9Y282 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
ERGIC3Q9Y282 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC15.02□□□□□ -0.01
ERGIC3Q9Y282 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC15.02□□□□□ -0.01
ERGIC3Q9Y282 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC15.02□□□□□ -0.01
ERGIC3Q9Y282 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
ERGIC3Q9Y282 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
ERGIC3Q9Y282 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
ERGIC3Q9Y282 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
ERGIC3Q9Y282 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
ERGIC3Q9Y282 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC15.02□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms