Protein–RNA interactions for Protein: Q9UGM1

CHRNA9, Neuronal acetylcholine receptor subunit alpha-9, humanhuman

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA9Q9UGM1 IMP4-203ENST00000409935 958 ntTSL 5 BASIC14.98□□□□□ -0.01
CHRNA9Q9UGM1 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CHRNA9Q9UGM1 AC092474.2-201ENST00000424288 719 ntBASIC14.98□□□□□ -0.01
CHRNA9Q9UGM1 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC14.98□□□□□ -0.01
CHRNA9Q9UGM1 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
CHRNA9Q9UGM1 PGAM5P1-201ENST00000518923 814 ntBASIC14.98□□□□□ -0.01
CHRNA9Q9UGM1 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
CHRNA9Q9UGM1 AP002472.1-201ENST00000577490 586 ntBASIC14.98□□□□□ -0.01
CHRNA9Q9UGM1 AL671883.3-201ENST00000603274 991 ntBASIC14.98□□□□□ -0.01
CHRNA9Q9UGM1 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC14.98□□□□□ -0.01
CHRNA9Q9UGM1 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC14.98□□□□□ -0.01
CHRNA9Q9UGM1 AL161645.1-201ENST00000622716 1255 ntBASIC14.98□□□□□ -0.01
CHRNA9Q9UGM1 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC14.98□□□□□ -0.01
CHRNA9Q9UGM1 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
CHRNA9Q9UGM1 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CHRNA9Q9UGM1 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
CHRNA9Q9UGM1 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CHRNA9Q9UGM1 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
CHRNA9Q9UGM1 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
CHRNA9Q9UGM1 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
CHRNA9Q9UGM1 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CHRNA9Q9UGM1 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC14.98□□□□□ -0.01
CHRNA9Q9UGM1 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
CHRNA9Q9UGM1 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC14.98□□□□□ -0.01
CHRNA9Q9UGM1 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC14.98□□□□□ -0.01
CHRNA9Q9UGM1 AC006449.6-201ENST00000612330 2296 ntBASIC14.97□□□□□ -0.01
CHRNA9Q9UGM1 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC14.97□□□□□ -0.01
CHRNA9Q9UGM1 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CHRNA9Q9UGM1 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CHRNA9Q9UGM1 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CHRNA9Q9UGM1 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
CHRNA9Q9UGM1 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC14.97□□□□□ -0.01
CHRNA9Q9UGM1 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
CHRNA9Q9UGM1 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CHRNA9Q9UGM1 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CHRNA9Q9UGM1 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC14.97□□□□□ -0.01
CHRNA9Q9UGM1 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CHRNA9Q9UGM1 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CHRNA9Q9UGM1 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CHRNA9Q9UGM1 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
CHRNA9Q9UGM1 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
CHRNA9Q9UGM1 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
CHRNA9Q9UGM1 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC14.97□□□□□ -0.01
CHRNA9Q9UGM1 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CHRNA9Q9UGM1 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CHRNA9Q9UGM1 FABP5-202ENST00000396359 986 ntTSL 5 BASIC14.97□□□□□ -0.01
CHRNA9Q9UGM1 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CHRNA9Q9UGM1 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC14.97□□□□□ -0.01
CHRNA9Q9UGM1 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC14.97□□□□□ -0.01
CHRNA9Q9UGM1 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC14.97□□□□□ -0.01
CHRNA9Q9UGM1 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC14.97□□□□□ -0.01
CHRNA9Q9UGM1 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
CHRNA9Q9UGM1 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC14.97□□□□□ -0.01
CHRNA9Q9UGM1 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CHRNA9Q9UGM1 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC14.97□□□□□ -0.01
CHRNA9Q9UGM1 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
CHRNA9Q9UGM1 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC14.97□□□□□ -0.01
CHRNA9Q9UGM1 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC14.97□□□□□ -0.01
CHRNA9Q9UGM1 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC14.97□□□□□ -0.01
CHRNA9Q9UGM1 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CHRNA9Q9UGM1 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CHRNA9Q9UGM1 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
CHRNA9Q9UGM1 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC14.97□□□□□ -0.01
CHRNA9Q9UGM1 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CHRNA9Q9UGM1 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CHRNA9Q9UGM1 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CHRNA9Q9UGM1 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CHRNA9Q9UGM1 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CHRNA9Q9UGM1 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC14.97□□□□□ -0.01
CHRNA9Q9UGM1 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CHRNA9Q9UGM1 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC14.97□□□□□ -0.01
CHRNA9Q9UGM1 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
CHRNA9Q9UGM1 FUK-207ENST00000571514 3054 ntTSL 2 BASIC14.96□□□□□ -0.01
CHRNA9Q9UGM1 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CHRNA9Q9UGM1 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
CHRNA9Q9UGM1 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
CHRNA9Q9UGM1 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CHRNA9Q9UGM1 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
CHRNA9Q9UGM1 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CHRNA9Q9UGM1 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC14.96□□□□□ -0.01
CHRNA9Q9UGM1 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CHRNA9Q9UGM1 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CHRNA9Q9UGM1 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC14.96□□□□□ -0.01
CHRNA9Q9UGM1 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC14.96□□□□□ -0.01
CHRNA9Q9UGM1 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.01
CHRNA9Q9UGM1 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CHRNA9Q9UGM1 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
CHRNA9Q9UGM1 NEK7-201ENST00000367383 586 ntTSL 2 BASIC14.96□□□□□ -0.01
CHRNA9Q9UGM1 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
CHRNA9Q9UGM1 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
CHRNA9Q9UGM1 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC14.96□□□□□ -0.01
CHRNA9Q9UGM1 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC14.96□□□□□ -0.01
CHRNA9Q9UGM1 AC004832.2-201ENST00000426397 482 ntBASIC14.96□□□□□ -0.01
CHRNA9Q9UGM1 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC14.96□□□□□ -0.01
CHRNA9Q9UGM1 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC14.96□□□□□ -0.01
CHRNA9Q9UGM1 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CHRNA9Q9UGM1 POU5F1P6-201ENST00000466990 990 ntBASIC14.96□□□□□ -0.01
CHRNA9Q9UGM1 KRT18P34-201ENST00000488218 1270 ntBASIC14.96□□□□□ -0.01
CHRNA9Q9UGM1 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC14.96□□□□□ -0.01
CHRNA9Q9UGM1 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms