Protein–RNA interactions for Protein: Q9P2X8

LINC00474, Putative uncharacterized protein encoded by LINC00474, humanhuman

Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00474Q9P2X8 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.68
LINC00474Q9P2X8 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
LINC00474Q9P2X8 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
LINC00474Q9P2X8 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC10.77□□□□□ -0.68
LINC00474Q9P2X8 AC104109.2-201ENST00000602919 1418 ntBASIC10.77□□□□□ -0.68
LINC00474Q9P2X8 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
LINC00474Q9P2X8 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
LINC00474Q9P2X8 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
LINC00474Q9P2X8 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
LINC00474Q9P2X8 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
LINC00474Q9P2X8 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
LINC00474Q9P2X8 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
LINC00474Q9P2X8 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
LINC00474Q9P2X8 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
LINC00474Q9P2X8 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC10.77□□□□□ -0.69
LINC00474Q9P2X8 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC10.77□□□□□ -0.69
LINC00474Q9P2X8 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
LINC00474Q9P2X8 TK2-221ENST00000620035 5060 ntTSL 2 BASIC10.77□□□□□ -0.69
LINC00474Q9P2X8 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
LINC00474Q9P2X8 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
LINC00474Q9P2X8 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC10.77□□□□□ -0.69
LINC00474Q9P2X8 FAM185BP-201ENST00000443595 716 ntBASIC10.77□□□□□ -0.69
LINC00474Q9P2X8 AL513480.1-201ENST00000451731 511 ntBASIC10.77□□□□□ -0.69
LINC00474Q9P2X8 HS6ST1P1-201ENST00000481504 1234 ntBASIC10.77□□□□□ -0.69
LINC00474Q9P2X8 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC10.77□□□□□ -0.69
LINC00474Q9P2X8 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC10.77□□□□□ -0.69
LINC00474Q9P2X8 AC096734.2-201ENST00000562054 433 ntBASIC10.77□□□□□ -0.69
LINC00474Q9P2X8 AL031432.2-201ENST00000566714 459 ntBASIC10.77□□□□□ -0.69
LINC00474Q9P2X8 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC10.77□□□□□ -0.69
LINC00474Q9P2X8 AL928711.1-201ENST00000570165 459 ntBASIC10.77□□□□□ -0.69
LINC00474Q9P2X8 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC10.77□□□□□ -0.69
LINC00474Q9P2X8 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC10.77□□□□□ -0.69
LINC00474Q9P2X8 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
LINC00474Q9P2X8 AL121894.2-201ENST00000602977 491 ntBASIC10.77□□□□□ -0.69
LINC00474Q9P2X8 AC023141.13-201ENST00000604991 943 ntBASIC10.77□□□□□ -0.69
LINC00474Q9P2X8 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
LINC00474Q9P2X8 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
LINC00474Q9P2X8 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC10.77□□□□□ -0.69
LINC00474Q9P2X8 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC10.77□□□□□ -0.69
LINC00474Q9P2X8 REXO1L3P-201ENST00000622202 1288 ntBASIC10.77□□□□□ -0.69
LINC00474Q9P2X8 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
LINC00474Q9P2X8 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
LINC00474Q9P2X8 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC10.77□□□□□ -0.69
LINC00474Q9P2X8 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
LINC00474Q9P2X8 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
LINC00474Q9P2X8 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
LINC00474Q9P2X8 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC10.77□□□□□ -0.69
LINC00474Q9P2X8 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
LINC00474Q9P2X8 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC10.77□□□□□ -0.69
LINC00474Q9P2X8 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
LINC00474Q9P2X8 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
LINC00474Q9P2X8 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC10.77□□□□□ -0.69
LINC00474Q9P2X8 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC10.77□□□□□ -0.69
LINC00474Q9P2X8 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC10.77□□□□□ -0.69
LINC00474Q9P2X8 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
LINC00474Q9P2X8 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
LINC00474Q9P2X8 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC10.77□□□□□ -0.69
LINC00474Q9P2X8 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC10.77□□□□□ -0.69
LINC00474Q9P2X8 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC10.77□□□□□ -0.69
LINC00474Q9P2X8 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
LINC00474Q9P2X8 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
LINC00474Q9P2X8 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
LINC00474Q9P2X8 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
LINC00474Q9P2X8 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
LINC00474Q9P2X8 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC10.76□□□□□ -0.69
LINC00474Q9P2X8 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC10.76□□□□□ -0.69
LINC00474Q9P2X8 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
LINC00474Q9P2X8 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC10.76□□□□□ -0.69
LINC00474Q9P2X8 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC10.76□□□□□ -0.69
LINC00474Q9P2X8 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC10.76□□□□□ -0.69
LINC00474Q9P2X8 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC10.76□□□□□ -0.69
LINC00474Q9P2X8 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC10.76□□□□□ -0.69
LINC00474Q9P2X8 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
LINC00474Q9P2X8 AL365209.1-201ENST00000624418 6473 ntBASIC10.76□□□□□ -0.69
LINC00474Q9P2X8 AC092053.1-201ENST00000605787 1936 ntBASIC10.76□□□□□ -0.69
LINC00474Q9P2X8 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
LINC00474Q9P2X8 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
LINC00474Q9P2X8 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
LINC00474Q9P2X8 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
LINC00474Q9P2X8 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC10.76□□□□□ -0.69
LINC00474Q9P2X8 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC10.76□□□□□ -0.69
LINC00474Q9P2X8 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC10.76□□□□□ -0.69
LINC00474Q9P2X8 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC10.76□□□□□ -0.69
LINC00474Q9P2X8 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
LINC00474Q9P2X8 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
LINC00474Q9P2X8 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC10.76□□□□□ -0.69
LINC00474Q9P2X8 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC10.76□□□□□ -0.69
LINC00474Q9P2X8 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
LINC00474Q9P2X8 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
LINC00474Q9P2X8 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
LINC00474Q9P2X8 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
LINC00474Q9P2X8 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC10.76□□□□□ -0.69
LINC00474Q9P2X8 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
LINC00474Q9P2X8 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
LINC00474Q9P2X8 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC10.76□□□□□ -0.69
LINC00474Q9P2X8 HNRNPA1P28-201ENST00000424481 961 ntBASIC10.76□□□□□ -0.69
LINC00474Q9P2X8 PMS2P1-201ENST00000431037 1228 ntBASIC10.76□□□□□ -0.69
LINC00474Q9P2X8 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC10.76□□□□□ -0.69
LINC00474Q9P2X8 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
LINC00474Q9P2X8 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC10.76□□□□□ -0.69
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms