Protein–RNA interactions for Protein: Q9NRG1

PRTFDC1, Phosphoribosyltransferase domain-containing protein 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRTFDC1Q9NRG1 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PRTFDC1Q9NRG1 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
PRTFDC1Q9NRG1 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PRTFDC1Q9NRG1 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PRTFDC1Q9NRG1 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PRTFDC1Q9NRG1 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC15.41■□□□□ 0.06
PRTFDC1Q9NRG1 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC15.41■□□□□ 0.06
PRTFDC1Q9NRG1 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
PRTFDC1Q9NRG1 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC15.4■□□□□ 0.06
PRTFDC1Q9NRG1 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC15.4■□□□□ 0.06
PRTFDC1Q9NRG1 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PRTFDC1Q9NRG1 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PRTFDC1Q9NRG1 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
PRTFDC1Q9NRG1 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PRTFDC1Q9NRG1 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
PRTFDC1Q9NRG1 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PRTFDC1Q9NRG1 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
PRTFDC1Q9NRG1 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
PRTFDC1Q9NRG1 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
PRTFDC1Q9NRG1 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC15.4■□□□□ 0.06
PRTFDC1Q9NRG1 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PRTFDC1Q9NRG1 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PRTFDC1Q9NRG1 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PRTFDC1Q9NRG1 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
PRTFDC1Q9NRG1 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC15.4■□□□□ 0.06
PRTFDC1Q9NRG1 FAM58DP-201ENST00000428076 619 ntBASIC15.4■□□□□ 0.06
PRTFDC1Q9NRG1 AC098859.1-201ENST00000502915 1238 ntBASIC15.4■□□□□ 0.06
PRTFDC1Q9NRG1 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC15.4■□□□□ 0.06
PRTFDC1Q9NRG1 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC15.4■□□□□ 0.06
PRTFDC1Q9NRG1 AC009093.7-201ENST00000623853 1223 ntBASIC15.4■□□□□ 0.06
PRTFDC1Q9NRG1 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC15.4■□□□□ 0.06
PRTFDC1Q9NRG1 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC15.4■□□□□ 0.06
PRTFDC1Q9NRG1 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC15.4■□□□□ 0.06
PRTFDC1Q9NRG1 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
PRTFDC1Q9NRG1 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC15.4■□□□□ 0.06
PRTFDC1Q9NRG1 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PRTFDC1Q9NRG1 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
PRTFDC1Q9NRG1 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PRTFDC1Q9NRG1 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PRTFDC1Q9NRG1 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC15.4■□□□□ 0.06
PRTFDC1Q9NRG1 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PRTFDC1Q9NRG1 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC15.4■□□□□ 0.06
PRTFDC1Q9NRG1 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC15.4■□□□□ 0.06
PRTFDC1Q9NRG1 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PRTFDC1Q9NRG1 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
PRTFDC1Q9NRG1 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PRTFDC1Q9NRG1 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PRTFDC1Q9NRG1 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
PRTFDC1Q9NRG1 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PRTFDC1Q9NRG1 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PRTFDC1Q9NRG1 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC15.39■□□□□ 0.05
PRTFDC1Q9NRG1 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PRTFDC1Q9NRG1 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PRTFDC1Q9NRG1 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC15.39■□□□□ 0.05
PRTFDC1Q9NRG1 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
PRTFDC1Q9NRG1 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PRTFDC1Q9NRG1 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
PRTFDC1Q9NRG1 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
PRTFDC1Q9NRG1 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC15.39■□□□□ 0.05
PRTFDC1Q9NRG1 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC15.39■□□□□ 0.05
PRTFDC1Q9NRG1 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PRTFDC1Q9NRG1 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PRTFDC1Q9NRG1 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC15.39■□□□□ 0.05
PRTFDC1Q9NRG1 RBPMS2P1-201ENST00000437762 623 ntBASIC15.39■□□□□ 0.05
PRTFDC1Q9NRG1 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PRTFDC1Q9NRG1 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC15.39■□□□□ 0.05
PRTFDC1Q9NRG1 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PRTFDC1Q9NRG1 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC15.39■□□□□ 0.05
PRTFDC1Q9NRG1 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC15.39■□□□□ 0.05
PRTFDC1Q9NRG1 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC15.39■□□□□ 0.05
PRTFDC1Q9NRG1 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC15.39■□□□□ 0.05
PRTFDC1Q9NRG1 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC15.39■□□□□ 0.05
PRTFDC1Q9NRG1 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
PRTFDC1Q9NRG1 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PRTFDC1Q9NRG1 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC15.39■□□□□ 0.05
PRTFDC1Q9NRG1 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PRTFDC1Q9NRG1 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
PRTFDC1Q9NRG1 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC15.39■□□□□ 0.05
PRTFDC1Q9NRG1 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PRTFDC1Q9NRG1 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
PRTFDC1Q9NRG1 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC15.38■□□□□ 0.05
PRTFDC1Q9NRG1 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC15.38■□□□□ 0.05
PRTFDC1Q9NRG1 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
PRTFDC1Q9NRG1 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC15.38■□□□□ 0.05
PRTFDC1Q9NRG1 FOXO1B-201ENST00000504678 1527 ntBASIC15.38■□□□□ 0.05
PRTFDC1Q9NRG1 AL589702.1-201ENST00000641229 1509 ntBASIC15.38■□□□□ 0.05
PRTFDC1Q9NRG1 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
PRTFDC1Q9NRG1 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC15.38■□□□□ 0.05
PRTFDC1Q9NRG1 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
PRTFDC1Q9NRG1 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC15.38■□□□□ 0.05
PRTFDC1Q9NRG1 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PRTFDC1Q9NRG1 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
PRTFDC1Q9NRG1 CES3-203ENST00000543856 3178 ntTSL 2 BASIC15.38■□□□□ 0.05
PRTFDC1Q9NRG1 RELA-227ENST00000615805 2236 ntTSL 5 BASIC15.38■□□□□ 0.05
PRTFDC1Q9NRG1 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
PRTFDC1Q9NRG1 TSEN15P1-201ENST00000423257 515 ntBASIC15.38■□□□□ 0.05
PRTFDC1Q9NRG1 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PRTFDC1Q9NRG1 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC15.38■□□□□ 0.05
PRTFDC1Q9NRG1 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
PRTFDC1Q9NRG1 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC15.38■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms