Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
RTN4Q9NQC3 LST1-205ENST00000376089 680 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RTN4Q9NQC3 LST1-206ENST00000376090 689 ntTSL 2 BASIC19.49■□□□□ 0.71
RTN4Q9NQC3 LST1-208ENST00000376093 648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
RTN4Q9NQC3 LST1-209ENST00000376096 565 ntTSL 2 BASIC19.49■□□□□ 0.71
RTN4Q9NQC3 LST1-210ENST00000376099 610 ntTSL 2 BASIC19.49■□□□□ 0.71
RTN4Q9NQC3 LST1-212ENST00000396101 459 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RTN4Q9NQC3 LST1-214ENST00000418507 726 ntTSL 2 BASIC19.49■□□□□ 0.71
RTN4Q9NQC3 LST1-217ENST00000438075 764 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
RTN4Q9NQC3 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC19.49■□□□□ 0.71
RTN4Q9NQC3 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC19.49■□□□□ 0.71
RTN4Q9NQC3 AL139317.3-201ENST00000555969 898 ntTSL 2 BASIC19.49■□□□□ 0.71
RTN4Q9NQC3 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC19.49■□□□□ 0.71
RTN4Q9NQC3 TK1-205ENST00000590862 642 ntTSL 3 BASIC19.49■□□□□ 0.71
RTN4Q9NQC3 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC19.49■□□□□ 0.71
RTN4Q9NQC3 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC19.49■□□□□ 0.71
RTN4Q9NQC3 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC19.49■□□□□ 0.71
RTN4Q9NQC3 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RTN4Q9NQC3 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RTN4Q9NQC3 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RTN4Q9NQC3 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
RTN4Q9NQC3 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
RTN4Q9NQC3 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC19.49■□□□□ 0.71
RTN4Q9NQC3 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RTN4Q9NQC3 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC19.49■□□□□ 0.71
RTN4Q9NQC3 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC19.49■□□□□ 0.71
RTN4Q9NQC3 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
RTN4Q9NQC3 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RTN4Q9NQC3 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RTN4Q9NQC3 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
RTN4Q9NQC3 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
RTN4Q9NQC3 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RTN4Q9NQC3 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC19.49■□□□□ 0.71
RTN4Q9NQC3 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC19.49■□□□□ 0.71
RTN4Q9NQC3 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC19.49■□□□□ 0.71
RTN4Q9NQC3 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC19.48■□□□□ 0.71
RTN4Q9NQC3 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RTN4Q9NQC3 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RTN4Q9NQC3 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC19.48■□□□□ 0.71
RTN4Q9NQC3 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
RTN4Q9NQC3 CICP17-201ENST00000418553 2377 ntBASIC19.48■□□□□ 0.71
RTN4Q9NQC3 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
RTN4Q9NQC3 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC19.48■□□□□ 0.71
RTN4Q9NQC3 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RTN4Q9NQC3 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RTN4Q9NQC3 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RTN4Q9NQC3 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC19.48■□□□□ 0.71
RTN4Q9NQC3 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
RTN4Q9NQC3 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RTN4Q9NQC3 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
RTN4Q9NQC3 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
RTN4Q9NQC3 CRAT-202ENST00000393384 973 ntTSL 2 BASIC19.48■□□□□ 0.71
RTN4Q9NQC3 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC19.48■□□□□ 0.71
RTN4Q9NQC3 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC19.48■□□□□ 0.71
RTN4Q9NQC3 SLC14A1-206ENST00000535474 1048 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RTN4Q9NQC3 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC19.48■□□□□ 0.71
RTN4Q9NQC3 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC19.48■□□□□ 0.71
RTN4Q9NQC3 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RTN4Q9NQC3 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC19.48■□□□□ 0.71
RTN4Q9NQC3 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RTN4Q9NQC3 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
RTN4Q9NQC3 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC19.48■□□□□ 0.71
RTN4Q9NQC3 AC027601.5-201ENST00000624065 2482 ntBASIC19.48■□□□□ 0.71
RTN4Q9NQC3 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
RTN4Q9NQC3 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
RTN4Q9NQC3 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
RTN4Q9NQC3 OTP-201ENST00000306422 3669 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RTN4Q9NQC3 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RTN4Q9NQC3 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RTN4Q9NQC3 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC19.48■□□□□ 0.71
RTN4Q9NQC3 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
RTN4Q9NQC3 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RTN4Q9NQC3 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
RTN4Q9NQC3 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RTN4Q9NQC3 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RTN4Q9NQC3 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RTN4Q9NQC3 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
RTN4Q9NQC3 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC19.47■□□□□ 0.71
RTN4Q9NQC3 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RTN4Q9NQC3 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RTN4Q9NQC3 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RTN4Q9NQC3 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RTN4Q9NQC3 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RTN4Q9NQC3 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
RTN4Q9NQC3 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
RTN4Q9NQC3 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC19.47■□□□□ 0.71
RTN4Q9NQC3 TNN-203ENST00000622870 3719 ntTSL 5 BASIC19.47■□□□□ 0.71
RTN4Q9NQC3 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC19.47■□□□□ 0.71
RTN4Q9NQC3 GRIPAP1-207ENST00000593475 2908 ntTSL 5 BASIC19.47■□□□□ 0.71
RTN4Q9NQC3 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC19.47■□□□□ 0.71
RTN4Q9NQC3 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RTN4Q9NQC3 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC19.47■□□□□ 0.71
RTN4Q9NQC3 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RTN4Q9NQC3 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RTN4Q9NQC3 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
RTN4Q9NQC3 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RTN4Q9NQC3 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC19.47■□□□□ 0.71
RTN4Q9NQC3 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
RTN4Q9NQC3 ECEL1P3-201ENST00000427961 737 ntBASIC19.47■□□□□ 0.71
RTN4Q9NQC3 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms