Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
LRTM1Q9HBL6 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LRTM1Q9HBL6 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LRTM1Q9HBL6 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LRTM1Q9HBL6 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LRTM1Q9HBL6 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC15.8■□□□□ 0.12
LRTM1Q9HBL6 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC15.8■□□□□ 0.12
LRTM1Q9HBL6 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC15.8■□□□□ 0.12
LRTM1Q9HBL6 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LRTM1Q9HBL6 MIR648-201ENST00000385046 94 ntBASIC15.8■□□□□ 0.12
LRTM1Q9HBL6 AC079781.3-201ENST00000449110 356 ntBASIC15.8■□□□□ 0.12
LRTM1Q9HBL6 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
LRTM1Q9HBL6 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC15.8■□□□□ 0.12
LRTM1Q9HBL6 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
LRTM1Q9HBL6 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC15.8■□□□□ 0.12
LRTM1Q9HBL6 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
LRTM1Q9HBL6 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC15.8■□□□□ 0.12
LRTM1Q9HBL6 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC15.8■□□□□ 0.12
LRTM1Q9HBL6 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
LRTM1Q9HBL6 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LRTM1Q9HBL6 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
LRTM1Q9HBL6 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
LRTM1Q9HBL6 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
LRTM1Q9HBL6 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
LRTM1Q9HBL6 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC15.8■□□□□ 0.12
LRTM1Q9HBL6 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
LRTM1Q9HBL6 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LRTM1Q9HBL6 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
LRTM1Q9HBL6 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LRTM1Q9HBL6 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
LRTM1Q9HBL6 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LRTM1Q9HBL6 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
LRTM1Q9HBL6 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
LRTM1Q9HBL6 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
LRTM1Q9HBL6 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
LRTM1Q9HBL6 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC15.79■□□□□ 0.12
LRTM1Q9HBL6 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC15.79■□□□□ 0.12
LRTM1Q9HBL6 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
LRTM1Q9HBL6 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LRTM1Q9HBL6 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LRTM1Q9HBL6 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC15.79■□□□□ 0.12
LRTM1Q9HBL6 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LRTM1Q9HBL6 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
LRTM1Q9HBL6 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LRTM1Q9HBL6 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LRTM1Q9HBL6 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
LRTM1Q9HBL6 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LRTM1Q9HBL6 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LRTM1Q9HBL6 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC15.79■□□□□ 0.12
LRTM1Q9HBL6 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LRTM1Q9HBL6 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
LRTM1Q9HBL6 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
LRTM1Q9HBL6 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC15.79■□□□□ 0.12
LRTM1Q9HBL6 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
LRTM1Q9HBL6 METTL26-205ENST00000397666 726 ntTSL 2 BASIC15.79■□□□□ 0.12
LRTM1Q9HBL6 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
LRTM1Q9HBL6 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC15.79■□□□□ 0.12
LRTM1Q9HBL6 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC15.79■□□□□ 0.12
LRTM1Q9HBL6 AL513480.1-201ENST00000451731 511 ntBASIC15.79■□□□□ 0.12
LRTM1Q9HBL6 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC15.79■□□□□ 0.12
LRTM1Q9HBL6 AL031432.2-201ENST00000566714 459 ntBASIC15.79■□□□□ 0.12
LRTM1Q9HBL6 AL928711.1-201ENST00000570165 459 ntBASIC15.79■□□□□ 0.12
LRTM1Q9HBL6 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LRTM1Q9HBL6 IRF5-214ENST00000613821 595 ntTSL 5 BASIC15.79■□□□□ 0.12
LRTM1Q9HBL6 AL645728.2-201ENST00000641974 660 ntBASIC15.79■□□□□ 0.12
LRTM1Q9HBL6 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC15.79■□□□□ 0.12
LRTM1Q9HBL6 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC15.79■□□□□ 0.12
LRTM1Q9HBL6 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
LRTM1Q9HBL6 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LRTM1Q9HBL6 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
LRTM1Q9HBL6 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LRTM1Q9HBL6 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LRTM1Q9HBL6 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LRTM1Q9HBL6 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LRTM1Q9HBL6 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC15.79■□□□□ 0.12
LRTM1Q9HBL6 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
LRTM1Q9HBL6 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LRTM1Q9HBL6 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LRTM1Q9HBL6 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
LRTM1Q9HBL6 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
LRTM1Q9HBL6 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LRTM1Q9HBL6 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC15.78■□□□□ 0.12
LRTM1Q9HBL6 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
LRTM1Q9HBL6 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LRTM1Q9HBL6 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LRTM1Q9HBL6 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC15.78■□□□□ 0.12
LRTM1Q9HBL6 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LRTM1Q9HBL6 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC15.78■□□□□ 0.12
LRTM1Q9HBL6 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LRTM1Q9HBL6 AC112504.1-201ENST00000623415 1841 ntBASIC15.78■□□□□ 0.12
LRTM1Q9HBL6 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
LRTM1Q9HBL6 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC15.78■□□□□ 0.12
LRTM1Q9HBL6 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LRTM1Q9HBL6 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LRTM1Q9HBL6 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC15.78■□□□□ 0.12
LRTM1Q9HBL6 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC15.78■□□□□ 0.12
LRTM1Q9HBL6 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LRTM1Q9HBL6 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC15.78■□□□□ 0.12
LRTM1Q9HBL6 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC15.78■□□□□ 0.12
LRTM1Q9HBL6 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 78.1 ms