Protein–RNA interactions for Protein: Q9BTD1

SHANK2-AS3, Putative uncharacterized protein SHANK2-AS3, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-AS3Q9BTD1 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SHANK2-AS3Q9BTD1 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SHANK2-AS3Q9BTD1 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
SHANK2-AS3Q9BTD1 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC12.65□□□□□ -0.38
SHANK2-AS3Q9BTD1 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
SHANK2-AS3Q9BTD1 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC12.65□□□□□ -0.38
SHANK2-AS3Q9BTD1 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SHANK2-AS3Q9BTD1 MBP-202ENST00000355994 2772 ntTSL 5 BASIC12.65□□□□□ -0.38
SHANK2-AS3Q9BTD1 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
SHANK2-AS3Q9BTD1 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SHANK2-AS3Q9BTD1 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
SHANK2-AS3Q9BTD1 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC12.65□□□□□ -0.38
SHANK2-AS3Q9BTD1 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
SHANK2-AS3Q9BTD1 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
SHANK2-AS3Q9BTD1 FLJ16779-201ENST00000612722 7638 ntBASIC12.65□□□□□ -0.38
SHANK2-AS3Q9BTD1 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC12.65□□□□□ -0.38
SHANK2-AS3Q9BTD1 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC12.65□□□□□ -0.38
SHANK2-AS3Q9BTD1 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
SHANK2-AS3Q9BTD1 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SHANK2-AS3Q9BTD1 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SHANK2-AS3Q9BTD1 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
SHANK2-AS3Q9BTD1 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC12.65□□□□□ -0.38
SHANK2-AS3Q9BTD1 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SHANK2-AS3Q9BTD1 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
SHANK2-AS3Q9BTD1 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SHANK2-AS3Q9BTD1 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
SHANK2-AS3Q9BTD1 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC12.65□□□□□ -0.38
SHANK2-AS3Q9BTD1 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
SHANK2-AS3Q9BTD1 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC12.65□□□□□ -0.38
SHANK2-AS3Q9BTD1 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC12.65□□□□□ -0.38
SHANK2-AS3Q9BTD1 AC073648.2-201ENST00000510116 352 ntBASIC12.65□□□□□ -0.38
SHANK2-AS3Q9BTD1 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC12.65□□□□□ -0.38
SHANK2-AS3Q9BTD1 NT5C-211ENST00000582170 653 ntTSL 3 BASIC12.65□□□□□ -0.38
SHANK2-AS3Q9BTD1 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC12.65□□□□□ -0.38
SHANK2-AS3Q9BTD1 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC12.65□□□□□ -0.38
SHANK2-AS3Q9BTD1 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SHANK2-AS3Q9BTD1 MYB-242ENST00000618728 3545 ntTSL 5 BASIC12.65□□□□□ -0.38
SHANK2-AS3Q9BTD1 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC12.65□□□□□ -0.38
SHANK2-AS3Q9BTD1 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SHANK2-AS3Q9BTD1 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SHANK2-AS3Q9BTD1 U82695.1-201ENST00000635752 1889 ntBASIC12.65□□□□□ -0.38
SHANK2-AS3Q9BTD1 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC12.65□□□□□ -0.38
SHANK2-AS3Q9BTD1 ING5-213ENST00000636051 4199 ntTSL 5 BASIC12.65□□□□□ -0.38
SHANK2-AS3Q9BTD1 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC12.65□□□□□ -0.39
SHANK2-AS3Q9BTD1 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC12.64□□□□□ -0.39
SHANK2-AS3Q9BTD1 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
SHANK2-AS3Q9BTD1 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC12.64□□□□□ -0.39
SHANK2-AS3Q9BTD1 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC12.64□□□□□ -0.39
SHANK2-AS3Q9BTD1 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SHANK2-AS3Q9BTD1 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
SHANK2-AS3Q9BTD1 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
SHANK2-AS3Q9BTD1 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC12.64□□□□□ -0.39
SHANK2-AS3Q9BTD1 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC12.64□□□□□ -0.39
SHANK2-AS3Q9BTD1 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC12.64□□□□□ -0.39
SHANK2-AS3Q9BTD1 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
SHANK2-AS3Q9BTD1 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
SHANK2-AS3Q9BTD1 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
SHANK2-AS3Q9BTD1 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SHANK2-AS3Q9BTD1 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
SHANK2-AS3Q9BTD1 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SHANK2-AS3Q9BTD1 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
SHANK2-AS3Q9BTD1 AC126177.1-201ENST00000547829 2218 ntBASIC12.64□□□□□ -0.39
SHANK2-AS3Q9BTD1 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC12.64□□□□□ -0.39
SHANK2-AS3Q9BTD1 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC12.64□□□□□ -0.39
SHANK2-AS3Q9BTD1 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
SHANK2-AS3Q9BTD1 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SHANK2-AS3Q9BTD1 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC12.64□□□□□ -0.39
SHANK2-AS3Q9BTD1 MRPL20P1-201ENST00000400819 433 ntBASIC12.64□□□□□ -0.39
SHANK2-AS3Q9BTD1 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC12.64□□□□□ -0.39
SHANK2-AS3Q9BTD1 RPS2P1-201ENST00000434010 821 ntBASIC12.64□□□□□ -0.39
SHANK2-AS3Q9BTD1 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC12.64□□□□□ -0.39
SHANK2-AS3Q9BTD1 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
SHANK2-AS3Q9BTD1 SKP2-204ENST00000508514 821 ntTSL 3 BASIC12.64□□□□□ -0.39
SHANK2-AS3Q9BTD1 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC12.64□□□□□ -0.39
SHANK2-AS3Q9BTD1 CIPC-205ENST00000555437 566 ntTSL 3 BASIC12.64□□□□□ -0.39
SHANK2-AS3Q9BTD1 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
SHANK2-AS3Q9BTD1 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SHANK2-AS3Q9BTD1 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC12.64□□□□□ -0.39
SHANK2-AS3Q9BTD1 AC021097.1-201ENST00000607902 574 ntBASIC12.64□□□□□ -0.39
SHANK2-AS3Q9BTD1 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SHANK2-AS3Q9BTD1 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SHANK2-AS3Q9BTD1 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC12.64□□□□□ -0.39
SHANK2-AS3Q9BTD1 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SHANK2-AS3Q9BTD1 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
SHANK2-AS3Q9BTD1 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SHANK2-AS3Q9BTD1 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SHANK2-AS3Q9BTD1 AC067930.6-201ENST00000623257 4947 ntBASIC12.64□□□□□ -0.39
SHANK2-AS3Q9BTD1 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC12.64□□□□□ -0.39
SHANK2-AS3Q9BTD1 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SHANK2-AS3Q9BTD1 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
SHANK2-AS3Q9BTD1 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC12.64□□□□□ -0.39
SHANK2-AS3Q9BTD1 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
SHANK2-AS3Q9BTD1 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SHANK2-AS3Q9BTD1 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SHANK2-AS3Q9BTD1 LINC00554-201ENST00000564841 3011 ntBASIC12.64□□□□□ -0.39
SHANK2-AS3Q9BTD1 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SHANK2-AS3Q9BTD1 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC12.64□□□□□ -0.39
SHANK2-AS3Q9BTD1 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SHANK2-AS3Q9BTD1 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SHANK2-AS3Q9BTD1 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC12.64□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms