Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC11.48□□□□□ -0.57
UPK3BQ9BT76 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
UPK3BQ9BT76 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
UPK3BQ9BT76 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
UPK3BQ9BT76 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
UPK3BQ9BT76 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
UPK3BQ9BT76 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC11.48□□□□□ -0.57
UPK3BQ9BT76 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
UPK3BQ9BT76 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
UPK3BQ9BT76 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC11.48□□□□□ -0.57
UPK3BQ9BT76 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
UPK3BQ9BT76 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
UPK3BQ9BT76 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
UPK3BQ9BT76 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
UPK3BQ9BT76 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
UPK3BQ9BT76 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
UPK3BQ9BT76 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC11.48□□□□□ -0.57
UPK3BQ9BT76 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
UPK3BQ9BT76 PCDHB17P-201ENST00000539533 2393 ntBASIC11.48□□□□□ -0.57
UPK3BQ9BT76 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
UPK3BQ9BT76 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
UPK3BQ9BT76 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
UPK3BQ9BT76 DOC2GP-204ENST00000639052 2548 ntBASIC11.48□□□□□ -0.57
UPK3BQ9BT76 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
UPK3BQ9BT76 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
UPK3BQ9BT76 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
UPK3BQ9BT76 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
UPK3BQ9BT76 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
UPK3BQ9BT76 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
UPK3BQ9BT76 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
UPK3BQ9BT76 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
UPK3BQ9BT76 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
UPK3BQ9BT76 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
UPK3BQ9BT76 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
UPK3BQ9BT76 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
UPK3BQ9BT76 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
UPK3BQ9BT76 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
UPK3BQ9BT76 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
UPK3BQ9BT76 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
UPK3BQ9BT76 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
UPK3BQ9BT76 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
UPK3BQ9BT76 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC11.47□□□□□ -0.57
UPK3BQ9BT76 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC11.47□□□□□ -0.57
UPK3BQ9BT76 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
UPK3BQ9BT76 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
UPK3BQ9BT76 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
UPK3BQ9BT76 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
UPK3BQ9BT76 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
UPK3BQ9BT76 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
UPK3BQ9BT76 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
UPK3BQ9BT76 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC11.47□□□□□ -0.57
UPK3BQ9BT76 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC11.47□□□□□ -0.57
UPK3BQ9BT76 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
UPK3BQ9BT76 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
UPK3BQ9BT76 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
UPK3BQ9BT76 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
UPK3BQ9BT76 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
UPK3BQ9BT76 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
UPK3BQ9BT76 SPDYE11-202ENST00000450699 704 ntBASIC11.47□□□□□ -0.57
UPK3BQ9BT76 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC11.47□□□□□ -0.57
UPK3BQ9BT76 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC11.47□□□□□ -0.57
UPK3BQ9BT76 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC11.47□□□□□ -0.57
UPK3BQ9BT76 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC11.47□□□□□ -0.57
UPK3BQ9BT76 SPDYE9P-201ENST00000570642 692 ntBASIC11.47□□□□□ -0.57
UPK3BQ9BT76 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC11.47□□□□□ -0.57
UPK3BQ9BT76 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC11.47□□□□□ -0.57
UPK3BQ9BT76 METTL23-205ENST00000588302 925 ntTSL 5 BASIC11.47□□□□□ -0.57
UPK3BQ9BT76 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC11.47□□□□□ -0.57
UPK3BQ9BT76 CYP2A7P1-201ENST00000595391 815 ntBASIC11.47□□□□□ -0.57
UPK3BQ9BT76 SIGLEC29P-201ENST00000599873 1114 ntBASIC11.47□□□□□ -0.57
UPK3BQ9BT76 AL596442.2-201ENST00000610240 980 ntBASIC11.47□□□□□ -0.57
UPK3BQ9BT76 SPDYE10P-202ENST00000612005 668 ntBASIC11.47□□□□□ -0.57
UPK3BQ9BT76 SPDYE8P-202ENST00000612377 668 ntBASIC11.47□□□□□ -0.57
UPK3BQ9BT76 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC11.47□□□□□ -0.57
UPK3BQ9BT76 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
UPK3BQ9BT76 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC11.47□□□□□ -0.57
UPK3BQ9BT76 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC11.47□□□□□ -0.57
UPK3BQ9BT76 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
UPK3BQ9BT76 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC11.47□□□□□ -0.57
UPK3BQ9BT76 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC11.47□□□□□ -0.57
UPK3BQ9BT76 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
UPK3BQ9BT76 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
UPK3BQ9BT76 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
UPK3BQ9BT76 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
UPK3BQ9BT76 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC11.47□□□□□ -0.57
UPK3BQ9BT76 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
UPK3BQ9BT76 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
UPK3BQ9BT76 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC11.47□□□□□ -0.57
UPK3BQ9BT76 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
UPK3BQ9BT76 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
UPK3BQ9BT76 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
UPK3BQ9BT76 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
UPK3BQ9BT76 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
UPK3BQ9BT76 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
UPK3BQ9BT76 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC11.46□□□□□ -0.57
UPK3BQ9BT76 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
UPK3BQ9BT76 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
UPK3BQ9BT76 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
UPK3BQ9BT76 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
UPK3BQ9BT76 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC11.46□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms