Protein–RNA interactions for Protein: Q99985

SEMA3C, Semaphorin-3C, humanhuman

Predictions only

Length 751 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3CQ99985 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
SEMA3CQ99985 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SEMA3CQ99985 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SEMA3CQ99985 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
SEMA3CQ99985 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
SEMA3CQ99985 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SEMA3CQ99985 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
SEMA3CQ99985 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SEMA3CQ99985 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC16.63■□□□□ 0.25
SEMA3CQ99985 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC16.63■□□□□ 0.25
SEMA3CQ99985 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SEMA3CQ99985 AL592309.1-201ENST00000443127 649 ntBASIC16.63■□□□□ 0.25
SEMA3CQ99985 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC16.63■□□□□ 0.25
SEMA3CQ99985 IGHV3-62-201ENST00000520057 340 ntBASIC16.63■□□□□ 0.25
SEMA3CQ99985 AC105233.2-201ENST00000523697 349 ntBASIC16.63■□□□□ 0.25
SEMA3CQ99985 AF228730.5-201ENST00000530288 346 ntBASIC16.63■□□□□ 0.25
SEMA3CQ99985 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC16.63■□□□□ 0.25
SEMA3CQ99985 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC16.63■□□□□ 0.25
SEMA3CQ99985 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC16.63■□□□□ 0.25
SEMA3CQ99985 AC073389.1-201ENST00000595595 795 ntBASIC16.63■□□□□ 0.25
SEMA3CQ99985 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC16.63■□□□□ 0.25
SEMA3CQ99985 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC16.63■□□□□ 0.25
SEMA3CQ99985 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
SEMA3CQ99985 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC16.63■□□□□ 0.25
SEMA3CQ99985 AL513210.1-201ENST00000629608 234 ntBASIC16.63■□□□□ 0.25
SEMA3CQ99985 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SEMA3CQ99985 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SEMA3CQ99985 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC16.63■□□□□ 0.25
SEMA3CQ99985 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
SEMA3CQ99985 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC16.63■□□□□ 0.25
SEMA3CQ99985 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SEMA3CQ99985 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SEMA3CQ99985 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
SEMA3CQ99985 U82695.1-201ENST00000635752 1889 ntBASIC16.63■□□□□ 0.25
SEMA3CQ99985 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC16.62■□□□□ 0.25
SEMA3CQ99985 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SEMA3CQ99985 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
SEMA3CQ99985 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SEMA3CQ99985 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SEMA3CQ99985 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
SEMA3CQ99985 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SEMA3CQ99985 STOM-202ENST00000347359 870 ntTSL 2 BASIC16.62■□□□□ 0.25
SEMA3CQ99985 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC16.62■□□□□ 0.25
SEMA3CQ99985 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC16.62■□□□□ 0.25
SEMA3CQ99985 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC16.62■□□□□ 0.25
SEMA3CQ99985 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC16.62■□□□□ 0.25
SEMA3CQ99985 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC16.62■□□□□ 0.25
SEMA3CQ99985 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
SEMA3CQ99985 LINC01225-203ENST00000563550 1244 ntBASIC16.62■□□□□ 0.25
SEMA3CQ99985 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC16.62■□□□□ 0.25
SEMA3CQ99985 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC16.62■□□□□ 0.25
SEMA3CQ99985 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC16.62■□□□□ 0.25
SEMA3CQ99985 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC16.62■□□□□ 0.25
SEMA3CQ99985 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SEMA3CQ99985 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SEMA3CQ99985 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
SEMA3CQ99985 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC16.62■□□□□ 0.25
SEMA3CQ99985 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SEMA3CQ99985 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
SEMA3CQ99985 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
SEMA3CQ99985 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SEMA3CQ99985 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SEMA3CQ99985 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SEMA3CQ99985 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SEMA3CQ99985 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SEMA3CQ99985 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC16.61■□□□□ 0.25
SEMA3CQ99985 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
SEMA3CQ99985 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
SEMA3CQ99985 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
SEMA3CQ99985 AC006449.6-201ENST00000612330 2296 ntBASIC16.61■□□□□ 0.25
SEMA3CQ99985 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SEMA3CQ99985 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC16.61■□□□□ 0.25
SEMA3CQ99985 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC16.61■□□□□ 0.25
SEMA3CQ99985 AC004461.1-201ENST00000412461 403 ntBASIC16.61■□□□□ 0.25
SEMA3CQ99985 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC16.61■□□□□ 0.25
SEMA3CQ99985 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
SEMA3CQ99985 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC16.61■□□□□ 0.25
SEMA3CQ99985 CYMP-203ENST00000474680 1263 ntBASIC16.61■□□□□ 0.25
SEMA3CQ99985 AC069335.1-201ENST00000489972 472 ntBASIC16.61■□□□□ 0.25
SEMA3CQ99985 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
SEMA3CQ99985 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC16.61■□□□□ 0.25
SEMA3CQ99985 CFL1-212ENST00000531413 636 ntTSL 3 BASIC16.61■□□□□ 0.25
SEMA3CQ99985 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC16.61■□□□□ 0.25
SEMA3CQ99985 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC16.61■□□□□ 0.25
SEMA3CQ99985 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC16.61■□□□□ 0.25
SEMA3CQ99985 NKG7-205ENST00000600427 520 ntTSL 3 BASIC16.61■□□□□ 0.25
SEMA3CQ99985 FHL2-212ENST00000607522 759 ntTSL 2 BASIC16.61■□□□□ 0.25
SEMA3CQ99985 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
SEMA3CQ99985 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SEMA3CQ99985 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SEMA3CQ99985 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
SEMA3CQ99985 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC16.61■□□□□ 0.25
SEMA3CQ99985 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SEMA3CQ99985 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SEMA3CQ99985 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC16.61■□□□□ 0.25
SEMA3CQ99985 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SEMA3CQ99985 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC16.61■□□□□ 0.25
SEMA3CQ99985 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
SEMA3CQ99985 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
SEMA3CQ99985 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms