Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDCA3Q99618 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDCA3Q99618 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDCA3Q99618 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDCA3Q99618 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CDCA3Q99618 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CDCA3Q99618 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
CDCA3Q99618 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDCA3Q99618 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CDCA3Q99618 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDCA3Q99618 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDCA3Q99618 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
CDCA3Q99618 RPL28-203ENST00000428193 573 ntTSL 2 BASIC16.84■□□□□ 0.29
CDCA3Q99618 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC16.84■□□□□ 0.29
CDCA3Q99618 AC245100.5-201ENST00000452108 331 ntBASIC16.84■□□□□ 0.29
CDCA3Q99618 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CDCA3Q99618 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CDCA3Q99618 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC16.84■□□□□ 0.29
CDCA3Q99618 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDCA3Q99618 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
CDCA3Q99618 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC16.84■□□□□ 0.29
CDCA3Q99618 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC16.84■□□□□ 0.29
CDCA3Q99618 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC16.84■□□□□ 0.29
CDCA3Q99618 RPL28-207ENST00000558815 616 ntTSL 2 BASIC16.84■□□□□ 0.29
CDCA3Q99618 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CDCA3Q99618 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC16.84■□□□□ 0.29
CDCA3Q99618 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC16.84■□□□□ 0.29
CDCA3Q99618 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
CDCA3Q99618 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC16.84■□□□□ 0.29
CDCA3Q99618 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC16.84■□□□□ 0.29
CDCA3Q99618 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
CDCA3Q99618 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
CDCA3Q99618 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDCA3Q99618 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
CDCA3Q99618 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC16.84■□□□□ 0.29
CDCA3Q99618 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDCA3Q99618 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDCA3Q99618 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CDCA3Q99618 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC16.84■□□□□ 0.29
CDCA3Q99618 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC16.84■□□□□ 0.29
CDCA3Q99618 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDCA3Q99618 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDCA3Q99618 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC16.84■□□□□ 0.29
CDCA3Q99618 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC16.83■□□□□ 0.29
CDCA3Q99618 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
CDCA3Q99618 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
CDCA3Q99618 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.29
CDCA3Q99618 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC16.83■□□□□ 0.29
CDCA3Q99618 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDCA3Q99618 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CDCA3Q99618 ZBTB12BP-201ENST00000314232 1122 ntBASIC16.83■□□□□ 0.28
CDCA3Q99618 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDCA3Q99618 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDCA3Q99618 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
CDCA3Q99618 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDCA3Q99618 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDCA3Q99618 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDCA3Q99618 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDCA3Q99618 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDCA3Q99618 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDCA3Q99618 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
CDCA3Q99618 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC16.83■□□□□ 0.28
CDCA3Q99618 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC16.83■□□□□ 0.28
CDCA3Q99618 YBX1P6-201ENST00000442962 1002 ntBASIC16.83■□□□□ 0.28
CDCA3Q99618 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
CDCA3Q99618 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC16.83■□□□□ 0.28
CDCA3Q99618 KRT8P37-201ENST00000451609 1420 ntBASIC16.83■□□□□ 0.28
CDCA3Q99618 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC16.83■□□□□ 0.28
CDCA3Q99618 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC16.83■□□□□ 0.28
CDCA3Q99618 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
CDCA3Q99618 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC16.83■□□□□ 0.28
CDCA3Q99618 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC16.83■□□□□ 0.28
CDCA3Q99618 RERG-209ENST00000546331 1383 ntTSL 2 BASIC16.83■□□□□ 0.28
CDCA3Q99618 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
CDCA3Q99618 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC16.83■□□□□ 0.28
CDCA3Q99618 AC124283.3-201ENST00000570869 594 ntBASIC16.83■□□□□ 0.28
CDCA3Q99618 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
CDCA3Q99618 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC16.83■□□□□ 0.28
CDCA3Q99618 TP73-213ENST00000604479 1623 ntTSL 5 BASIC16.83■□□□□ 0.28
CDCA3Q99618 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC16.83■□□□□ 0.28
CDCA3Q99618 INTS4P2-202ENST00000614726 2019 ntBASIC16.83■□□□□ 0.28
CDCA3Q99618 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
CDCA3Q99618 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC16.83■□□□□ 0.28
CDCA3Q99618 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC16.83■□□□□ 0.28
CDCA3Q99618 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.28
CDCA3Q99618 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CDCA3Q99618 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
CDCA3Q99618 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
CDCA3Q99618 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
CDCA3Q99618 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CDCA3Q99618 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC16.82■□□□□ 0.28
CDCA3Q99618 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDCA3Q99618 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
CDCA3Q99618 AMT-206ENST00000458307 1860 ntTSL 2 BASIC16.82■□□□□ 0.28
CDCA3Q99618 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDCA3Q99618 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDCA3Q99618 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC16.82■□□□□ 0.28
CDCA3Q99618 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
CDCA3Q99618 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC16.82■□□□□ 0.28
CDCA3Q99618 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 60 ms