Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
PHOX2BQ99453 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PHOX2BQ99453 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PHOX2BQ99453 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PHOX2BQ99453 AL080243.2-201ENST00000418783 582 ntBASIC16.59■□□□□ 0.25
PHOX2BQ99453 HINT2P1-201ENST00000419438 481 ntBASIC16.59■□□□□ 0.25
PHOX2BQ99453 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC16.59■□□□□ 0.25
PHOX2BQ99453 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PHOX2BQ99453 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC16.59■□□□□ 0.25
PHOX2BQ99453 ZNF890P-202ENST00000530367 1156 ntBASIC16.59■□□□□ 0.25
PHOX2BQ99453 TPRX2P-201ENST00000535362 881 ntBASIC16.59■□□□□ 0.25
PHOX2BQ99453 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC16.59■□□□□ 0.25
PHOX2BQ99453 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC16.59■□□□□ 0.25
PHOX2BQ99453 AC137936.2-202ENST00000638124 1146 ntTSL 5 BASIC16.59■□□□□ 0.25
PHOX2BQ99453 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PHOX2BQ99453 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PHOX2BQ99453 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC16.59■□□□□ 0.25
PHOX2BQ99453 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
PHOX2BQ99453 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PHOX2BQ99453 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PHOX2BQ99453 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PHOX2BQ99453 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC16.59■□□□□ 0.25
PHOX2BQ99453 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PHOX2BQ99453 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
PHOX2BQ99453 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
PHOX2BQ99453 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
PHOX2BQ99453 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
PHOX2BQ99453 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
PHOX2BQ99453 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
PHOX2BQ99453 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
PHOX2BQ99453 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC16.58■□□□□ 0.25
PHOX2BQ99453 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.25
PHOX2BQ99453 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
PHOX2BQ99453 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PHOX2BQ99453 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PHOX2BQ99453 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PHOX2BQ99453 KRTAP4-4-201ENST00000390661 1081 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
PHOX2BQ99453 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC16.58■□□□□ 0.24
PHOX2BQ99453 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC16.58■□□□□ 0.24
PHOX2BQ99453 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PHOX2BQ99453 KRT18P34-201ENST00000488218 1270 ntBASIC16.58■□□□□ 0.24
PHOX2BQ99453 FADS2-212ENST00000522639 360 ntTSL 5 BASIC16.58■□□□□ 0.24
PHOX2BQ99453 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC16.58■□□□□ 0.24
PHOX2BQ99453 AP001889.1-201ENST00000525414 633 ntBASIC16.58■□□□□ 0.24
PHOX2BQ99453 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC16.58■□□□□ 0.24
PHOX2BQ99453 AL512361.1-201ENST00000554200 418 ntBASIC16.58■□□□□ 0.24
PHOX2BQ99453 HNRNPUP1-201ENST00000554987 333 ntBASIC16.58■□□□□ 0.24
PHOX2BQ99453 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC16.58■□□□□ 0.24
PHOX2BQ99453 FADS2-215ENST00000574708 385 ntTSL 3 BASIC16.58■□□□□ 0.24
PHOX2BQ99453 AC005412.3-201ENST00000580309 715 ntBASIC16.58■□□□□ 0.24
PHOX2BQ99453 AC026740.1-201ENST00000607068 791 ntBASIC16.58■□□□□ 0.24
PHOX2BQ99453 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC16.58■□□□□ 0.24
PHOX2BQ99453 AC015967.2-201ENST00000624092 234 ntBASIC16.58■□□□□ 0.24
PHOX2BQ99453 AC006435.4-201ENST00000625037 234 ntBASIC16.58■□□□□ 0.24
PHOX2BQ99453 AL356737.1-201ENST00000634391 234 ntBASIC16.58■□□□□ 0.24
PHOX2BQ99453 AL033527.5-201ENST00000641382 801 ntBASIC16.58■□□□□ 0.24
PHOX2BQ99453 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC16.58■□□□□ 0.24
PHOX2BQ99453 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC16.58■□□□□ 0.24
PHOX2BQ99453 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC16.58■□□□□ 0.24
PHOX2BQ99453 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PHOX2BQ99453 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PHOX2BQ99453 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
PHOX2BQ99453 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC16.58■□□□□ 0.24
PHOX2BQ99453 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
PHOX2BQ99453 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
PHOX2BQ99453 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
PHOX2BQ99453 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
PHOX2BQ99453 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PHOX2BQ99453 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PHOX2BQ99453 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PHOX2BQ99453 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PHOX2BQ99453 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
PHOX2BQ99453 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PHOX2BQ99453 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PHOX2BQ99453 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PHOX2BQ99453 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
PHOX2BQ99453 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
PHOX2BQ99453 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
PHOX2BQ99453 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
PHOX2BQ99453 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
PHOX2BQ99453 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PHOX2BQ99453 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC16.57■□□□□ 0.24
PHOX2BQ99453 FAM21FP-201ENST00000426241 1131 ntBASIC16.57■□□□□ 0.24
PHOX2BQ99453 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC16.57■□□□□ 0.24
PHOX2BQ99453 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
PHOX2BQ99453 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC16.57■□□□□ 0.24
PHOX2BQ99453 AL589987.1-201ENST00000453380 819 ntBASIC16.57■□□□□ 0.24
PHOX2BQ99453 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC16.57■□□□□ 0.24
PHOX2BQ99453 AC002558.1-201ENST00000488906 803 ntBASIC16.57■□□□□ 0.24
PHOX2BQ99453 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC16.57■□□□□ 0.24
PHOX2BQ99453 BANF1P1-201ENST00000553684 263 ntBASIC16.57■□□□□ 0.24
PHOX2BQ99453 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
PHOX2BQ99453 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC16.57■□□□□ 0.24
PHOX2BQ99453 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC16.57■□□□□ 0.24
PHOX2BQ99453 AC010319.3-201ENST00000597028 470 ntBASIC16.57■□□□□ 0.24
PHOX2BQ99453 SRD5A3P1-201ENST00000603021 949 ntBASIC16.57■□□□□ 0.24
PHOX2BQ99453 AL031055.1-201ENST00000606362 631 ntBASIC16.57■□□□□ 0.24
PHOX2BQ99453 TEX48-202ENST00000612244 662 ntTSL 3 BASIC16.57■□□□□ 0.24
PHOX2BQ99453 RPSAP52-203ENST00000622976 1023 ntBASIC16.57■□□□□ 0.24
PHOX2BQ99453 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms