Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
COL21A1Q96P44 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
COL21A1Q96P44 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC15.55■□□□□ 0.08
COL21A1Q96P44 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
COL21A1Q96P44 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
COL21A1Q96P44 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC15.55■□□□□ 0.08
COL21A1Q96P44 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
COL21A1Q96P44 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
COL21A1Q96P44 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
COL21A1Q96P44 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC15.55■□□□□ 0.08
COL21A1Q96P44 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
COL21A1Q96P44 AL512652.2-201ENST00000625156 1716 ntBASIC15.55■□□□□ 0.08
COL21A1Q96P44 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
COL21A1Q96P44 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
COL21A1Q96P44 MTHFR-217ENST00000641820 1569 ntBASIC15.55■□□□□ 0.08
COL21A1Q96P44 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
COL21A1Q96P44 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
COL21A1Q96P44 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
COL21A1Q96P44 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC15.55■□□□□ 0.08
COL21A1Q96P44 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
COL21A1Q96P44 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
COL21A1Q96P44 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC15.55■□□□□ 0.08
COL21A1Q96P44 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
COL21A1Q96P44 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC15.55■□□□□ 0.08
COL21A1Q96P44 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
COL21A1Q96P44 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC15.55■□□□□ 0.08
COL21A1Q96P44 KRT18P3-201ENST00000451602 1288 ntBASIC15.55■□□□□ 0.08
COL21A1Q96P44 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC15.55■□□□□ 0.08
COL21A1Q96P44 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
COL21A1Q96P44 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
COL21A1Q96P44 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC15.55■□□□□ 0.08
COL21A1Q96P44 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC15.55■□□□□ 0.08
COL21A1Q96P44 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
COL21A1Q96P44 AC096734.2-201ENST00000562054 433 ntBASIC15.55■□□□□ 0.08
COL21A1Q96P44 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC15.55■□□□□ 0.08
COL21A1Q96P44 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
COL21A1Q96P44 MIR4492-201ENST00000581627 80 ntBASIC15.55■□□□□ 0.08
COL21A1Q96P44 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC15.55■□□□□ 0.08
COL21A1Q96P44 ACTL9-202ENST00000612068 1252 ntBASIC15.55■□□□□ 0.08
COL21A1Q96P44 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC15.55■□□□□ 0.08
COL21A1Q96P44 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
COL21A1Q96P44 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
COL21A1Q96P44 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
COL21A1Q96P44 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
COL21A1Q96P44 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
COL21A1Q96P44 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
COL21A1Q96P44 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC15.55■□□□□ 0.08
COL21A1Q96P44 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC15.54■□□□□ 0.08
COL21A1Q96P44 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC15.54■□□□□ 0.08
COL21A1Q96P44 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC15.54■□□□□ 0.08
COL21A1Q96P44 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
COL21A1Q96P44 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
COL21A1Q96P44 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
COL21A1Q96P44 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
COL21A1Q96P44 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC15.54■□□□□ 0.08
COL21A1Q96P44 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
COL21A1Q96P44 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC15.54■□□□□ 0.08
COL21A1Q96P44 MYB-201ENST00000316528 3571 ntTSL 5 BASIC15.54■□□□□ 0.08
COL21A1Q96P44 MYB-241ENST00000616088 3573 ntTSL 5 BASIC15.54■□□□□ 0.08
COL21A1Q96P44 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
COL21A1Q96P44 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC15.54■□□□□ 0.08
COL21A1Q96P44 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC15.54■□□□□ 0.08
COL21A1Q96P44 PC-214ENST00000628663 1470 ntTSL 5 BASIC15.54■□□□□ 0.08
COL21A1Q96P44 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
COL21A1Q96P44 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
COL21A1Q96P44 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
COL21A1Q96P44 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
COL21A1Q96P44 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
COL21A1Q96P44 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC15.54■□□□□ 0.08
COL21A1Q96P44 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
COL21A1Q96P44 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
COL21A1Q96P44 MIR574-201ENST00000385209 96 ntBASIC15.54■□□□□ 0.08
COL21A1Q96P44 MIR940-201ENST00000401276 94 ntBASIC15.54■□□□□ 0.08
COL21A1Q96P44 PMS2P1-201ENST00000431037 1228 ntBASIC15.54■□□□□ 0.08
COL21A1Q96P44 AP000347.1-202ENST00000435868 847 ntBASIC15.54■□□□□ 0.08
COL21A1Q96P44 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC15.54■□□□□ 0.08
COL21A1Q96P44 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC15.54■□□□□ 0.08
COL21A1Q96P44 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC15.54■□□□□ 0.08
COL21A1Q96P44 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC15.54■□□□□ 0.08
COL21A1Q96P44 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC15.54■□□□□ 0.08
COL21A1Q96P44 AC010507.1-201ENST00000633895 436 ntBASIC15.54■□□□□ 0.08
COL21A1Q96P44 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
COL21A1Q96P44 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
COL21A1Q96P44 AC068418.2-201ENST00000577309 3703 ntBASIC15.54■□□□□ 0.08
COL21A1Q96P44 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
COL21A1Q96P44 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC15.54■□□□□ 0.08
COL21A1Q96P44 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
COL21A1Q96P44 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC15.54■□□□□ 0.08
COL21A1Q96P44 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC15.54■□□□□ 0.08
COL21A1Q96P44 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
COL21A1Q96P44 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
COL21A1Q96P44 AC131009.4-201ENST00000624048 1740 ntBASIC15.54■□□□□ 0.08
COL21A1Q96P44 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC15.54■□□□□ 0.08
COL21A1Q96P44 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
COL21A1Q96P44 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
COL21A1Q96P44 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
COL21A1Q96P44 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
COL21A1Q96P44 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
COL21A1Q96P44 PKD1P5-201ENST00000532415 10291 ntBASIC15.53■□□□□ 0.08
COL21A1Q96P44 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms