Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CHAMP1Q96JM3 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CHAMP1Q96JM3 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC19.03■□□□□ 0.64
CHAMP1Q96JM3 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CHAMP1Q96JM3 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC19.03■□□□□ 0.64
CHAMP1Q96JM3 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC19.03■□□□□ 0.64
CHAMP1Q96JM3 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
CHAMP1Q96JM3 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC19.03■□□□□ 0.64
CHAMP1Q96JM3 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CHAMP1Q96JM3 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC19.03■□□□□ 0.64
CHAMP1Q96JM3 POU5F1P6-201ENST00000466990 990 ntBASIC19.03■□□□□ 0.64
CHAMP1Q96JM3 RPS15P9-201ENST00000494093 319 ntBASIC19.03■□□□□ 0.64
CHAMP1Q96JM3 MMP17-203ENST00000535004 719 ntTSL 3 BASIC19.03■□□□□ 0.64
CHAMP1Q96JM3 OR7E47P-204ENST00000575924 449 ntBASIC19.03■□□□□ 0.64
CHAMP1Q96JM3 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CHAMP1Q96JM3 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CHAMP1Q96JM3 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
CHAMP1Q96JM3 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
CHAMP1Q96JM3 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CHAMP1Q96JM3 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
CHAMP1Q96JM3 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CHAMP1Q96JM3 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
CHAMP1Q96JM3 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CHAMP1Q96JM3 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
CHAMP1Q96JM3 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
CHAMP1Q96JM3 SLC9A3P2-201ENST00000447821 2021 ntBASIC19.03■□□□□ 0.64
CHAMP1Q96JM3 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CHAMP1Q96JM3 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
CHAMP1Q96JM3 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC19.03■□□□□ 0.64
CHAMP1Q96JM3 AL353732.1-201ENST00000569618 1459 ntBASIC19.03■□□□□ 0.64
CHAMP1Q96JM3 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
CHAMP1Q96JM3 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC19.02■□□□□ 0.64
CHAMP1Q96JM3 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CHAMP1Q96JM3 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CHAMP1Q96JM3 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC19.02■□□□□ 0.64
CHAMP1Q96JM3 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC19.02■□□□□ 0.64
CHAMP1Q96JM3 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
CHAMP1Q96JM3 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CHAMP1Q96JM3 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CHAMP1Q96JM3 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CHAMP1Q96JM3 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CHAMP1Q96JM3 DFFB-203ENST00000341385 572 ntTSL 5 BASIC19.02■□□□□ 0.64
CHAMP1Q96JM3 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CHAMP1Q96JM3 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC19.02■□□□□ 0.64
CHAMP1Q96JM3 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CHAMP1Q96JM3 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC19.02■□□□□ 0.64
CHAMP1Q96JM3 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC19.02■□□□□ 0.64
CHAMP1Q96JM3 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC19.02■□□□□ 0.64
CHAMP1Q96JM3 SDHD-206ENST00000528182 754 ntTSL 3 BASIC19.02■□□□□ 0.64
CHAMP1Q96JM3 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC19.02■□□□□ 0.64
CHAMP1Q96JM3 PRR29-207ENST00000580752 458 ntTSL 3 BASIC19.02■□□□□ 0.64
CHAMP1Q96JM3 AF228730.7-201ENST00000641842 219 ntBASIC19.02■□□□□ 0.64
CHAMP1Q96JM3 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
CHAMP1Q96JM3 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
CHAMP1Q96JM3 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CHAMP1Q96JM3 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC19.02■□□□□ 0.63
CHAMP1Q96JM3 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
CHAMP1Q96JM3 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CHAMP1Q96JM3 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
CHAMP1Q96JM3 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
CHAMP1Q96JM3 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC19.02■□□□□ 0.63
CHAMP1Q96JM3 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
CHAMP1Q96JM3 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC19.01■□□□□ 0.63
CHAMP1Q96JM3 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC19.01■□□□□ 0.63
CHAMP1Q96JM3 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CHAMP1Q96JM3 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CHAMP1Q96JM3 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CHAMP1Q96JM3 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC19.01■□□□□ 0.63
CHAMP1Q96JM3 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
CHAMP1Q96JM3 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC19.01■□□□□ 0.63
CHAMP1Q96JM3 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
CHAMP1Q96JM3 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CHAMP1Q96JM3 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
CHAMP1Q96JM3 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CHAMP1Q96JM3 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CHAMP1Q96JM3 AC022532.1-201ENST00000624563 1728 ntBASIC19.01■□□□□ 0.63
CHAMP1Q96JM3 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC19.01■□□□□ 0.63
CHAMP1Q96JM3 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC19.01■□□□□ 0.63
CHAMP1Q96JM3 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CHAMP1Q96JM3 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
CHAMP1Q96JM3 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CHAMP1Q96JM3 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CHAMP1Q96JM3 TSPY19P-201ENST00000418461 509 ntBASIC19.01■□□□□ 0.63
CHAMP1Q96JM3 KRT18P27-201ENST00000427733 1299 ntBASIC19.01■□□□□ 0.63
CHAMP1Q96JM3 RPS2P1-201ENST00000434010 821 ntBASIC19.01■□□□□ 0.63
CHAMP1Q96JM3 TSPY18P-201ENST00000441642 509 ntBASIC19.01■□□□□ 0.63
CHAMP1Q96JM3 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC19.01■□□□□ 0.63
CHAMP1Q96JM3 AC087641.1-201ENST00000557561 1021 ntBASIC19.01■□□□□ 0.63
CHAMP1Q96JM3 PNMT-203ENST00000581428 677 ntTSL 2 BASIC19.01■□□□□ 0.63
CHAMP1Q96JM3 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC19.01■□□□□ 0.63
CHAMP1Q96JM3 REXO1L6P-202ENST00000619970 1078 ntBASIC19.01■□□□□ 0.63
CHAMP1Q96JM3 AC139530.3-201ENST00000620344 690 ntBASIC19.01■□□□□ 0.63
CHAMP1Q96JM3 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC19.01■□□□□ 0.63
CHAMP1Q96JM3 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CHAMP1Q96JM3 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC19.01■□□□□ 0.63
CHAMP1Q96JM3 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
CHAMP1Q96JM3 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CHAMP1Q96JM3 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CHAMP1Q96JM3 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CHAMP1Q96JM3 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms