Protein–RNA interactions for Protein: Q96GM5

SMARCD1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1Q96GM5 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC17.18■□□□□ 0.34
SMARCD1Q96GM5 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
SMARCD1Q96GM5 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
SMARCD1Q96GM5 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC17.18■□□□□ 0.34
SMARCD1Q96GM5 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC17.18■□□□□ 0.34
SMARCD1Q96GM5 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
SMARCD1Q96GM5 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SMARCD1Q96GM5 AC105021.1-202ENST00000570572 669 ntBASIC17.18■□□□□ 0.34
SMARCD1Q96GM5 LITAF-210ENST00000571976 548 ntTSL 2 BASIC17.18■□□□□ 0.34
SMARCD1Q96GM5 LITAF-214ENST00000574703 486 ntTSL 2 BASIC17.18■□□□□ 0.34
SMARCD1Q96GM5 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SMARCD1Q96GM5 AL158211.3-201ENST00000607385 239 ntBASIC17.18■□□□□ 0.34
SMARCD1Q96GM5 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC17.18■□□□□ 0.34
SMARCD1Q96GM5 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SMARCD1Q96GM5 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC17.18■□□□□ 0.34
SMARCD1Q96GM5 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC17.18■□□□□ 0.34
SMARCD1Q96GM5 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC17.18■□□□□ 0.34
SMARCD1Q96GM5 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SMARCD1Q96GM5 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC17.18■□□□□ 0.34
SMARCD1Q96GM5 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SMARCD1Q96GM5 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SMARCD1Q96GM5 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC17.18■□□□□ 0.34
SMARCD1Q96GM5 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SMARCD1Q96GM5 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
SMARCD1Q96GM5 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC17.17■□□□□ 0.34
SMARCD1Q96GM5 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC17.17■□□□□ 0.34
SMARCD1Q96GM5 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC17.17■□□□□ 0.34
SMARCD1Q96GM5 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SMARCD1Q96GM5 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SMARCD1Q96GM5 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
SMARCD1Q96GM5 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SMARCD1Q96GM5 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SMARCD1Q96GM5 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SMARCD1Q96GM5 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
SMARCD1Q96GM5 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
SMARCD1Q96GM5 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC17.17■□□□□ 0.34
SMARCD1Q96GM5 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SMARCD1Q96GM5 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SMARCD1Q96GM5 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SMARCD1Q96GM5 VMA21-202ENST00000370361 693 ntTSL 5 BASIC17.17■□□□□ 0.34
SMARCD1Q96GM5 MIR770-201ENST00000390219 98 ntBASIC17.17■□□□□ 0.34
SMARCD1Q96GM5 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SMARCD1Q96GM5 TREML5P-201ENST00000421694 576 ntBASIC17.17■□□□□ 0.34
SMARCD1Q96GM5 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
SMARCD1Q96GM5 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SMARCD1Q96GM5 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC17.17■□□□□ 0.34
SMARCD1Q96GM5 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SMARCD1Q96GM5 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC17.17■□□□□ 0.34
SMARCD1Q96GM5 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC17.17■□□□□ 0.34
SMARCD1Q96GM5 BANF1P1-201ENST00000553684 263 ntBASIC17.17■□□□□ 0.34
SMARCD1Q96GM5 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC17.17■□□□□ 0.34
SMARCD1Q96GM5 NAA38-207ENST00000576861 556 ntTSL 3 BASIC17.17■□□□□ 0.34
SMARCD1Q96GM5 AC005498.2-205ENST00000593218 784 ntBASIC17.17■□□□□ 0.34
SMARCD1Q96GM5 AC026979.3-201ENST00000607315 403 ntBASIC17.17■□□□□ 0.34
SMARCD1Q96GM5 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
SMARCD1Q96GM5 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC17.17■□□□□ 0.34
SMARCD1Q96GM5 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
SMARCD1Q96GM5 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SMARCD1Q96GM5 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SMARCD1Q96GM5 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SMARCD1Q96GM5 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SMARCD1Q96GM5 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC17.17■□□□□ 0.34
SMARCD1Q96GM5 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SMARCD1Q96GM5 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
SMARCD1Q96GM5 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC17.17■□□□□ 0.34
SMARCD1Q96GM5 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
SMARCD1Q96GM5 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC17.16■□□□□ 0.34
SMARCD1Q96GM5 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SMARCD1Q96GM5 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SMARCD1Q96GM5 FO538757.1-201ENST00000623083 1397 ntBASIC17.16■□□□□ 0.34
SMARCD1Q96GM5 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
SMARCD1Q96GM5 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SMARCD1Q96GM5 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SMARCD1Q96GM5 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
SMARCD1Q96GM5 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SMARCD1Q96GM5 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC17.16■□□□□ 0.34
SMARCD1Q96GM5 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC17.16■□□□□ 0.34
SMARCD1Q96GM5 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC17.16■□□□□ 0.34
SMARCD1Q96GM5 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SMARCD1Q96GM5 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC17.16■□□□□ 0.34
SMARCD1Q96GM5 SATB1-217ENST00000493952 626 ntTSL 3 BASIC17.16■□□□□ 0.34
SMARCD1Q96GM5 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC17.16■□□□□ 0.34
SMARCD1Q96GM5 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
SMARCD1Q96GM5 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SMARCD1Q96GM5 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
SMARCD1Q96GM5 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
SMARCD1Q96GM5 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SMARCD1Q96GM5 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC17.16■□□□□ 0.34
SMARCD1Q96GM5 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SMARCD1Q96GM5 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SMARCD1Q96GM5 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC17.16■□□□□ 0.34
SMARCD1Q96GM5 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SMARCD1Q96GM5 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
SMARCD1Q96GM5 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC17.16■□□□□ 0.34
SMARCD1Q96GM5 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SMARCD1Q96GM5 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
SMARCD1Q96GM5 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SMARCD1Q96GM5 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
SMARCD1Q96GM5 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
SMARCD1Q96GM5 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 72 ms