Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 FAM86C2P-203ENST00000528684 1004 ntBASIC19.49■□□□□ 0.71
DDX11Q96FC9 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC19.49■□□□□ 0.71
DDX11Q96FC9 AC011467.4-201ENST00000594891 528 ntBASIC19.49■□□□□ 0.71
DDX11Q96FC9 AC092364.2-202ENST00000597012 1073 ntBASIC19.49■□□□□ 0.71
DDX11Q96FC9 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC19.49■□□□□ 0.71
DDX11Q96FC9 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC19.49■□□□□ 0.71
DDX11Q96FC9 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
DDX11Q96FC9 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC19.49■□□□□ 0.71
DDX11Q96FC9 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
DDX11Q96FC9 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC19.49■□□□□ 0.71
DDX11Q96FC9 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
DDX11Q96FC9 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
DDX11Q96FC9 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC19.49■□□□□ 0.71
DDX11Q96FC9 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
DDX11Q96FC9 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
DDX11Q96FC9 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
DDX11Q96FC9 GCK-209ENST00000616242 2260 ntTSL 5 BASIC19.49■□□□□ 0.71
DDX11Q96FC9 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC19.49■□□□□ 0.71
DDX11Q96FC9 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC19.49■□□□□ 0.71
DDX11Q96FC9 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
DDX11Q96FC9 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
DDX11Q96FC9 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC19.49■□□□□ 0.71
DDX11Q96FC9 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
DDX11Q96FC9 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC19.48■□□□□ 0.71
DDX11Q96FC9 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
DDX11Q96FC9 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
DDX11Q96FC9 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC19.48■□□□□ 0.71
DDX11Q96FC9 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC19.48■□□□□ 0.71
DDX11Q96FC9 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
DDX11Q96FC9 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
DDX11Q96FC9 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
DDX11Q96FC9 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
DDX11Q96FC9 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
DDX11Q96FC9 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
DDX11Q96FC9 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
DDX11Q96FC9 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC19.48■□□□□ 0.71
DDX11Q96FC9 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC19.48■□□□□ 0.71
DDX11Q96FC9 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
DDX11Q96FC9 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC19.48■□□□□ 0.71
DDX11Q96FC9 AC140658.5-201ENST00000438532 169 ntBASIC19.48■□□□□ 0.71
DDX11Q96FC9 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC19.48■□□□□ 0.71
DDX11Q96FC9 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
DDX11Q96FC9 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC19.48■□□□□ 0.71
DDX11Q96FC9 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC19.48■□□□□ 0.71
DDX11Q96FC9 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC19.48■□□□□ 0.71
DDX11Q96FC9 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
DDX11Q96FC9 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
DDX11Q96FC9 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
DDX11Q96FC9 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
DDX11Q96FC9 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
DDX11Q96FC9 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
DDX11Q96FC9 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC19.48■□□□□ 0.71
DDX11Q96FC9 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
DDX11Q96FC9 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC19.48■□□□□ 0.71
DDX11Q96FC9 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC19.48■□□□□ 0.71
DDX11Q96FC9 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
DDX11Q96FC9 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC19.48■□□□□ 0.71
DDX11Q96FC9 CYP2T1P-202ENST00000641596 2535 ntBASIC19.48■□□□□ 0.71
DDX11Q96FC9 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
DDX11Q96FC9 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC19.48■□□□□ 0.71
DDX11Q96FC9 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
DDX11Q96FC9 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
DDX11Q96FC9 AC026691.1-201ENST00000602502 2017 ntBASIC19.47■□□□□ 0.71
DDX11Q96FC9 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC19.47■□□□□ 0.71
DDX11Q96FC9 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
DDX11Q96FC9 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC19.47■□□□□ 0.71
DDX11Q96FC9 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
DDX11Q96FC9 HARS-203ENST00000431330 1774 ntTSL 2 BASIC19.47■□□□□ 0.71
DDX11Q96FC9 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
DDX11Q96FC9 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC19.47■□□□□ 0.71
DDX11Q96FC9 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
DDX11Q96FC9 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
DDX11Q96FC9 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC19.47■□□□□ 0.71
DDX11Q96FC9 AC132872.4-202ENST00000622924 2756 ntBASIC19.47■□□□□ 0.71
DDX11Q96FC9 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
DDX11Q96FC9 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
DDX11Q96FC9 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
DDX11Q96FC9 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
DDX11Q96FC9 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
DDX11Q96FC9 AL355306.1-201ENST00000415580 579 ntBASIC19.47■□□□□ 0.71
DDX11Q96FC9 SPDYE11-202ENST00000450699 704 ntBASIC19.47■□□□□ 0.71
DDX11Q96FC9 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC19.47■□□□□ 0.71
DDX11Q96FC9 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
DDX11Q96FC9 SPDYE9P-201ENST00000570642 692 ntBASIC19.47■□□□□ 0.71
DDX11Q96FC9 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC19.47■□□□□ 0.71
DDX11Q96FC9 MIR4515-201ENST00000584082 81 ntBASIC19.47■□□□□ 0.71
DDX11Q96FC9 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
DDX11Q96FC9 SPDYE10P-202ENST00000612005 668 ntBASIC19.47■□□□□ 0.71
DDX11Q96FC9 SPDYE8P-202ENST00000612377 668 ntBASIC19.47■□□□□ 0.71
DDX11Q96FC9 AC093512.1-201ENST00000617969 520 ntBASIC19.47■□□□□ 0.71
DDX11Q96FC9 LINC00628-201ENST00000628516 1289 ntBASIC19.47■□□□□ 0.71
DDX11Q96FC9 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
DDX11Q96FC9 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
DDX11Q96FC9 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC19.47■□□□□ 0.71
DDX11Q96FC9 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC19.47■□□□□ 0.71
DDX11Q96FC9 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
DDX11Q96FC9 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
DDX11Q96FC9 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
DDX11Q96FC9 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
DDX11Q96FC9 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC19.47■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms