Protein–RNA interactions for Protein: Q96A23

CPNE4, Copine-4, humanhuman

Predicted RBP Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4Q96A23 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC14.75□□□□□ -0.05
CPNE4Q96A23 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
CPNE4Q96A23 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC14.75□□□□□ -0.05
CPNE4Q96A23 AC069335.1-201ENST00000489972 472 ntBASIC14.75□□□□□ -0.05
CPNE4Q96A23 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC14.75□□□□□ -0.05
CPNE4Q96A23 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC14.75□□□□□ -0.05
CPNE4Q96A23 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC14.75□□□□□ -0.05
CPNE4Q96A23 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC14.75□□□□□ -0.05
CPNE4Q96A23 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC14.75□□□□□ -0.05
CPNE4Q96A23 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC14.75□□□□□ -0.05
CPNE4Q96A23 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC14.75□□□□□ -0.05
CPNE4Q96A23 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CPNE4Q96A23 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
CPNE4Q96A23 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CPNE4Q96A23 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CPNE4Q96A23 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CPNE4Q96A23 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CPNE4Q96A23 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC14.75□□□□□ -0.05
CPNE4Q96A23 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
CPNE4Q96A23 UXT-AS1-201ENST00000590504 1525 ntBASIC14.75□□□□□ -0.05
CPNE4Q96A23 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC14.75□□□□□ -0.05
CPNE4Q96A23 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC14.75□□□□□ -0.05
CPNE4Q96A23 AGGF1P2-201ENST00000426656 2106 ntBASIC14.75□□□□□ -0.05
CPNE4Q96A23 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC14.75□□□□□ -0.05
CPNE4Q96A23 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CPNE4Q96A23 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC14.75□□□□□ -0.05
CPNE4Q96A23 UBALD1-205ENST00000590891 2641 ntBASIC14.75□□□□□ -0.05
CPNE4Q96A23 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC14.75□□□□□ -0.05
CPNE4Q96A23 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CPNE4Q96A23 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
CPNE4Q96A23 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CPNE4Q96A23 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
CPNE4Q96A23 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CPNE4Q96A23 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC14.74□□□□□ -0.05
CPNE4Q96A23 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
CPNE4Q96A23 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CPNE4Q96A23 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CPNE4Q96A23 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
CPNE4Q96A23 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CPNE4Q96A23 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.05
CPNE4Q96A23 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CPNE4Q96A23 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CPNE4Q96A23 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
CPNE4Q96A23 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CPNE4Q96A23 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC14.74□□□□□ -0.05
CPNE4Q96A23 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC14.74□□□□□ -0.05
CPNE4Q96A23 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC14.74□□□□□ -0.05
CPNE4Q96A23 KRT18P32-201ENST00000424695 1287 ntBASIC14.74□□□□□ -0.05
CPNE4Q96A23 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC14.74□□□□□ -0.05
CPNE4Q96A23 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CPNE4Q96A23 LINC01225-203ENST00000563550 1244 ntBASIC14.74□□□□□ -0.05
CPNE4Q96A23 AP000842.3-202ENST00000569238 1080 ntBASIC14.74□□□□□ -0.05
CPNE4Q96A23 NKG7-205ENST00000600427 520 ntTSL 3 BASIC14.74□□□□□ -0.05
CPNE4Q96A23 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC14.74□□□□□ -0.05
CPNE4Q96A23 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC14.74□□□□□ -0.05
CPNE4Q96A23 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CPNE4Q96A23 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CPNE4Q96A23 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CPNE4Q96A23 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CPNE4Q96A23 FLJ38576-201ENST00000623820 2459 ntBASIC14.74□□□□□ -0.05
CPNE4Q96A23 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC14.74□□□□□ -0.05
CPNE4Q96A23 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CPNE4Q96A23 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.05
CPNE4Q96A23 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CPNE4Q96A23 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CPNE4Q96A23 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CPNE4Q96A23 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
CPNE4Q96A23 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC14.74□□□□□ -0.05
CPNE4Q96A23 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
CPNE4Q96A23 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CPNE4Q96A23 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
CPNE4Q96A23 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC14.73□□□□□ -0.05
CPNE4Q96A23 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
CPNE4Q96A23 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
CPNE4Q96A23 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CPNE4Q96A23 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
CPNE4Q96A23 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CPNE4Q96A23 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CPNE4Q96A23 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CPNE4Q96A23 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC14.73□□□□□ -0.05
CPNE4Q96A23 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
CPNE4Q96A23 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
CPNE4Q96A23 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC14.73□□□□□ -0.05
CPNE4Q96A23 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CPNE4Q96A23 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CPNE4Q96A23 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CPNE4Q96A23 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC14.73□□□□□ -0.05
CPNE4Q96A23 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC14.73□□□□□ -0.05
CPNE4Q96A23 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC14.73□□□□□ -0.05
CPNE4Q96A23 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC14.73□□□□□ -0.05
CPNE4Q96A23 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC14.73□□□□□ -0.05
CPNE4Q96A23 POU5F1P6-201ENST00000466990 990 ntBASIC14.73□□□□□ -0.05
CPNE4Q96A23 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC14.73□□□□□ -0.05
CPNE4Q96A23 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC14.73□□□□□ -0.05
CPNE4Q96A23 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC14.73□□□□□ -0.05
CPNE4Q96A23 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC14.73□□□□□ -0.05
CPNE4Q96A23 AC009093.7-201ENST00000623853 1223 ntBASIC14.73□□□□□ -0.05
CPNE4Q96A23 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC14.73□□□□□ -0.05
CPNE4Q96A23 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC14.73□□□□□ -0.05
CPNE4Q96A23 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC14.73□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms