Protein–RNA interactions for Protein: Q92738

USP6NL, USP6 N-terminal-like protein, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NLQ92738 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
USP6NLQ92738 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
USP6NLQ92738 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
USP6NLQ92738 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
USP6NLQ92738 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
USP6NLQ92738 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
USP6NLQ92738 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
USP6NLQ92738 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
USP6NLQ92738 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
USP6NLQ92738 AC020916.1-201ENST00000587762 1774 ntBASIC18.42■□□□□ 0.54
USP6NLQ92738 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
USP6NLQ92738 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
USP6NLQ92738 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
USP6NLQ92738 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
USP6NLQ92738 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
USP6NLQ92738 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
USP6NLQ92738 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
USP6NLQ92738 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
USP6NLQ92738 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
USP6NLQ92738 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
USP6NLQ92738 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC18.42■□□□□ 0.54
USP6NLQ92738 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
USP6NLQ92738 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
USP6NLQ92738 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
USP6NLQ92738 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
USP6NLQ92738 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
USP6NLQ92738 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
USP6NLQ92738 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
USP6NLQ92738 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
USP6NLQ92738 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
USP6NLQ92738 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
USP6NLQ92738 AL031731.1-201ENST00000642131 2094 ntBASIC18.42■□□□□ 0.54
USP6NLQ92738 AL645728.1-201ENST00000366221 2101 ntBASIC18.41■□□□□ 0.54
USP6NLQ92738 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
USP6NLQ92738 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
USP6NLQ92738 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
USP6NLQ92738 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
USP6NLQ92738 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC18.41■□□□□ 0.54
USP6NLQ92738 FST-202ENST00000396947 2538 ntTSL 5 BASIC18.41■□□□□ 0.54
USP6NLQ92738 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC18.41■□□□□ 0.54
USP6NLQ92738 FAM86MP-201ENST00000340703 885 ntBASIC18.41■□□□□ 0.54
USP6NLQ92738 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
USP6NLQ92738 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
USP6NLQ92738 FO393414.2-201ENST00000405153 598 ntBASIC18.41■□□□□ 0.54
USP6NLQ92738 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
USP6NLQ92738 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC18.41■□□□□ 0.54
USP6NLQ92738 USP32P1-208ENST00000506594 1164 ntBASIC18.41■□□□□ 0.54
USP6NLQ92738 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
USP6NLQ92738 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC18.41■□□□□ 0.54
USP6NLQ92738 AL391069.4-201ENST00000609583 481 ntBASIC18.41■□□□□ 0.54
USP6NLQ92738 WNT11-204ENST00000621122 789 ntTSL 5 BASIC18.41■□□□□ 0.54
USP6NLQ92738 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC18.41■□□□□ 0.54
USP6NLQ92738 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC18.41■□□□□ 0.54
USP6NLQ92738 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
USP6NLQ92738 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
USP6NLQ92738 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
USP6NLQ92738 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
USP6NLQ92738 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC18.41■□□□□ 0.54
USP6NLQ92738 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
USP6NLQ92738 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
USP6NLQ92738 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
USP6NLQ92738 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC18.41■□□□□ 0.54
USP6NLQ92738 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
USP6NLQ92738 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
USP6NLQ92738 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
USP6NLQ92738 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC18.4■□□□□ 0.54
USP6NLQ92738 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
USP6NLQ92738 EML3-212ENST00000494176 2901 ntTSL 2 BASIC18.4■□□□□ 0.54
USP6NLQ92738 EML3-216ENST00000529309 2909 ntTSL 2 BASIC18.4■□□□□ 0.54
USP6NLQ92738 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
USP6NLQ92738 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
USP6NLQ92738 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
USP6NLQ92738 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
USP6NLQ92738 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
USP6NLQ92738 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
USP6NLQ92738 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
USP6NLQ92738 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
USP6NLQ92738 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
USP6NLQ92738 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC18.4■□□□□ 0.54
USP6NLQ92738 BNIP3P42-201ENST00000454982 569 ntBASIC18.4■□□□□ 0.54
USP6NLQ92738 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC18.4■□□□□ 0.54
USP6NLQ92738 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC18.4■□□□□ 0.54
USP6NLQ92738 MIR4525-201ENST00000580000 75 ntBASIC18.4■□□□□ 0.54
USP6NLQ92738 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC18.4■□□□□ 0.54
USP6NLQ92738 BTNL10-201ENST00000595971 695 ntBASIC18.4■□□□□ 0.54
USP6NLQ92738 BNIP3P29-201ENST00000598302 571 ntBASIC18.4■□□□□ 0.54
USP6NLQ92738 AC011447.5-201ENST00000616168 564 ntBASIC18.4■□□□□ 0.54
USP6NLQ92738 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC18.4■□□□□ 0.54
USP6NLQ92738 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
USP6NLQ92738 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
USP6NLQ92738 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
USP6NLQ92738 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
USP6NLQ92738 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
USP6NLQ92738 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
USP6NLQ92738 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
USP6NLQ92738 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
USP6NLQ92738 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
USP6NLQ92738 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC18.4■□□□□ 0.54
USP6NLQ92738 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC18.39■□□□□ 0.54
USP6NLQ92738 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms