Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC17.02■□□□□ 0.32
ATG4AQ8WYN0 HMGA1P7-201ENST00000406908 502 ntBASIC17.02■□□□□ 0.32
ATG4AQ8WYN0 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
ATG4AQ8WYN0 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC17.02■□□□□ 0.32
ATG4AQ8WYN0 AC079781.3-201ENST00000449110 356 ntBASIC17.02■□□□□ 0.32
ATG4AQ8WYN0 AF186996.4-201ENST00000467186 377 ntBASIC17.02■□□□□ 0.32
ATG4AQ8WYN0 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC17.02■□□□□ 0.32
ATG4AQ8WYN0 U1.21-201ENST00000580816 167 ntBASIC17.02■□□□□ 0.32
ATG4AQ8WYN0 AL049840.3-201ENST00000602669 611 ntBASIC17.02■□□□□ 0.32
ATG4AQ8WYN0 FAM215A-202ENST00000632077 792 ntBASIC17.02■□□□□ 0.32
ATG4AQ8WYN0 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC17.02■□□□□ 0.32
ATG4AQ8WYN0 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.31
ATG4AQ8WYN0 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC17.02■□□□□ 0.31
ATG4AQ8WYN0 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.31
ATG4AQ8WYN0 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
ATG4AQ8WYN0 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
ATG4AQ8WYN0 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC17.02■□□□□ 0.31
ATG4AQ8WYN0 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
ATG4AQ8WYN0 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
ATG4AQ8WYN0 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
ATG4AQ8WYN0 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
ATG4AQ8WYN0 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
ATG4AQ8WYN0 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC17.01■□□□□ 0.31
ATG4AQ8WYN0 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ATG4AQ8WYN0 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC17.01■□□□□ 0.31
ATG4AQ8WYN0 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
ATG4AQ8WYN0 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
ATG4AQ8WYN0 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
ATG4AQ8WYN0 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
ATG4AQ8WYN0 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC17.01■□□□□ 0.31
ATG4AQ8WYN0 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
ATG4AQ8WYN0 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ATG4AQ8WYN0 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ATG4AQ8WYN0 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ATG4AQ8WYN0 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC17.01■□□□□ 0.31
ATG4AQ8WYN0 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
ATG4AQ8WYN0 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ATG4AQ8WYN0 AP002414.2-201ENST00000591780 3365 ntBASIC17.01■□□□□ 0.31
ATG4AQ8WYN0 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
ATG4AQ8WYN0 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
ATG4AQ8WYN0 MED22-202ENST00000371999 987 ntTSL 3 BASIC17.01■□□□□ 0.31
ATG4AQ8WYN0 IPPK-202ENST00000375522 882 ntTSL 3 BASIC17.01■□□□□ 0.31
ATG4AQ8WYN0 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
ATG4AQ8WYN0 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC17.01■□□□□ 0.31
ATG4AQ8WYN0 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC17.01■□□□□ 0.31
ATG4AQ8WYN0 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
ATG4AQ8WYN0 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ATG4AQ8WYN0 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
ATG4AQ8WYN0 AL160237.2-201ENST00000556165 472 ntBASIC17.01■□□□□ 0.31
ATG4AQ8WYN0 MIR4515-201ENST00000584082 81 ntBASIC17.01■□□□□ 0.31
ATG4AQ8WYN0 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
ATG4AQ8WYN0 AL691432.3-201ENST00000621860 400 ntBASIC17.01■□□□□ 0.31
ATG4AQ8WYN0 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
ATG4AQ8WYN0 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC17.01■□□□□ 0.31
ATG4AQ8WYN0 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
ATG4AQ8WYN0 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ATG4AQ8WYN0 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ATG4AQ8WYN0 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
ATG4AQ8WYN0 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
ATG4AQ8WYN0 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC17.01■□□□□ 0.31
ATG4AQ8WYN0 AC073347.1-201ENST00000421633 2643 ntBASIC17■□□□□ 0.31
ATG4AQ8WYN0 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
ATG4AQ8WYN0 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
ATG4AQ8WYN0 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
ATG4AQ8WYN0 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ATG4AQ8WYN0 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ATG4AQ8WYN0 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
ATG4AQ8WYN0 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ATG4AQ8WYN0 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC17■□□□□ 0.31
ATG4AQ8WYN0 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC17■□□□□ 0.31
ATG4AQ8WYN0 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ATG4AQ8WYN0 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ATG4AQ8WYN0 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ATG4AQ8WYN0 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC17■□□□□ 0.31
ATG4AQ8WYN0 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC17■□□□□ 0.31
ATG4AQ8WYN0 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC17■□□□□ 0.31
ATG4AQ8WYN0 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC17■□□□□ 0.31
ATG4AQ8WYN0 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC17■□□□□ 0.31
ATG4AQ8WYN0 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC17■□□□□ 0.31
ATG4AQ8WYN0 AC092910.1-201ENST00000482027 1129 ntBASIC17■□□□□ 0.31
ATG4AQ8WYN0 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
ATG4AQ8WYN0 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC17■□□□□ 0.31
ATG4AQ8WYN0 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC17■□□□□ 0.31
ATG4AQ8WYN0 MIR4751-201ENST00000578027 74 ntBASIC17■□□□□ 0.31
ATG4AQ8WYN0 PGM5P2-202ENST00000637225 1043 ntBASIC17■□□□□ 0.31
ATG4AQ8WYN0 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC17■□□□□ 0.31
ATG4AQ8WYN0 VPS51-217ENST00000639871 243 ntTSL 5 BASIC17■□□□□ 0.31
ATG4AQ8WYN0 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC17■□□□□ 0.31
ATG4AQ8WYN0 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ATG4AQ8WYN0 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC17■□□□□ 0.31
ATG4AQ8WYN0 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC17■□□□□ 0.31
ATG4AQ8WYN0 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC17■□□□□ 0.31
ATG4AQ8WYN0 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
ATG4AQ8WYN0 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
ATG4AQ8WYN0 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC17■□□□□ 0.31
ATG4AQ8WYN0 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ATG4AQ8WYN0 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC17■□□□□ 0.31
ATG4AQ8WYN0 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ATG4AQ8WYN0 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC17■□□□□ 0.31
ATG4AQ8WYN0 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms