Protein–RNA interactions for Protein: Q8WXC6

COPS9, COP9 signalosome complex subunit 9, humanhuman

Predictions only

Length 57 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS9Q8WXC6 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
COPS9Q8WXC6 VCP-201ENST00000358901 4370 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
COPS9Q8WXC6 DLGAP2-214ENST00000612087 10088 ntAPPRIS P2 TSL 5 BASIC11.12□□□□□ -0.63
COPS9Q8WXC6 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC11.11□□□□□ -0.63
COPS9Q8WXC6 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC11.11□□□□□ -0.63
COPS9Q8WXC6 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC11.11□□□□□ -0.63
COPS9Q8WXC6 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC11.11□□□□□ -0.63
COPS9Q8WXC6 DKFZP434H168-201ENST00000567381 1905 ntBASIC11.11□□□□□ -0.63
COPS9Q8WXC6 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
COPS9Q8WXC6 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
COPS9Q8WXC6 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
COPS9Q8WXC6 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
COPS9Q8WXC6 XPOT-201ENST00000332707 6414 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
COPS9Q8WXC6 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
COPS9Q8WXC6 CFAP74-209ENST00000493964 5247 ntAPPRIS P5 TSL 5 BASIC11.11□□□□□ -0.63
COPS9Q8WXC6 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC11.11□□□□□ -0.63
COPS9Q8WXC6 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC11.11□□□□□ -0.63
COPS9Q8WXC6 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
COPS9Q8WXC6 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC11.11□□□□□ -0.63
COPS9Q8WXC6 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
COPS9Q8WXC6 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
COPS9Q8WXC6 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
COPS9Q8WXC6 FAM168B-202ENST00000409185 5285 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
COPS9Q8WXC6 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
COPS9Q8WXC6 ID1-201ENST00000376105 1233 ntBASIC11.11□□□□□ -0.63
COPS9Q8WXC6 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
COPS9Q8WXC6 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC11.11□□□□□ -0.63
COPS9Q8WXC6 STK19B-204ENST00000512515 211 ntBASIC11.11□□□□□ -0.63
COPS9Q8WXC6 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC11.11□□□□□ -0.63
COPS9Q8WXC6 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC11.11□□□□□ -0.63
COPS9Q8WXC6 STK25P1-201ENST00000585406 838 ntBASIC11.11□□□□□ -0.63
COPS9Q8WXC6 TK1-205ENST00000590862 642 ntTSL 3 BASIC11.11□□□□□ -0.63
COPS9Q8WXC6 ABBA01031661.1-201ENST00000634362 1253 ntBASIC11.11□□□□□ -0.63
COPS9Q8WXC6 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC11.11□□□□□ -0.63
COPS9Q8WXC6 VPS13A-204ENST00000376634 10269 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
COPS9Q8WXC6 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
COPS9Q8WXC6 LINC01144-201ENST00000626198 1710 ntBASIC11.11□□□□□ -0.63
COPS9Q8WXC6 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC11.11□□□□□ -0.63
COPS9Q8WXC6 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
COPS9Q8WXC6 TCF12-201ENST00000267811 6061 ntAPPRIS ALT1 TSL 1 (best) BASIC11.11□□□□□ -0.63
COPS9Q8WXC6 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
COPS9Q8WXC6 AC006486.2-201ENST00000624246 2199 ntBASIC11.11□□□□□ -0.63
COPS9Q8WXC6 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC11.11□□□□□ -0.63
COPS9Q8WXC6 BAIAP3-201ENST00000324385 4678 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
COPS9Q8WXC6 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
COPS9Q8WXC6 FOS-208ENST00000555686 1496 ntTSL 2 BASIC11.11□□□□□ -0.63
COPS9Q8WXC6 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC11.11□□□□□ -0.63
COPS9Q8WXC6 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
COPS9Q8WXC6 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
COPS9Q8WXC6 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
COPS9Q8WXC6 PPT1-215ENST00000641471 2368 ntBASIC11.11□□□□□ -0.63
COPS9Q8WXC6 PLEKHG2-203ENST00000425673 8132 ntAPPRIS P2 TSL 2 BASIC11.11□□□□□ -0.63
COPS9Q8WXC6 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
COPS9Q8WXC6 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
COPS9Q8WXC6 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC11.11□□□□□ -0.63
COPS9Q8WXC6 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
COPS9Q8WXC6 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
COPS9Q8WXC6 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
COPS9Q8WXC6 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC11.11□□□□□ -0.63
COPS9Q8WXC6 IRAK1BP1-201ENST00000369940 5656 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
COPS9Q8WXC6 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
COPS9Q8WXC6 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC11.1□□□□□ -0.63
COPS9Q8WXC6 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC11.1□□□□□ -0.63
COPS9Q8WXC6 KRT8P49-201ENST00000604166 1432 ntBASIC11.1□□□□□ -0.63
COPS9Q8WXC6 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
COPS9Q8WXC6 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
COPS9Q8WXC6 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC11.1□□□□□ -0.63
COPS9Q8WXC6 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
COPS9Q8WXC6 AC006277.1-201ENST00000624348 1610 ntBASIC11.1□□□□□ -0.63
COPS9Q8WXC6 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC11.1□□□□□ -0.63
COPS9Q8WXC6 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
COPS9Q8WXC6 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
COPS9Q8WXC6 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
COPS9Q8WXC6 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC11.1□□□□□ -0.63
COPS9Q8WXC6 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC11.1□□□□□ -0.63
COPS9Q8WXC6 AC112504.1-201ENST00000623415 1841 ntBASIC11.1□□□□□ -0.63
COPS9Q8WXC6 CACNA1G-232ENST00000515411 6960 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
COPS9Q8WXC6 CACNA1G-233ENST00000515765 6981 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
COPS9Q8WXC6 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
COPS9Q8WXC6 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
COPS9Q8WXC6 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
COPS9Q8WXC6 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
COPS9Q8WXC6 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
COPS9Q8WXC6 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC11.1□□□□□ -0.63
COPS9Q8WXC6 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
COPS9Q8WXC6 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
COPS9Q8WXC6 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
COPS9Q8WXC6 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC11.1□□□□□ -0.63
COPS9Q8WXC6 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC11.1□□□□□ -0.63
COPS9Q8WXC6 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC11.1□□□□□ -0.63
COPS9Q8WXC6 AP003733.1-201ENST00000491725 852 ntBASIC11.1□□□□□ -0.63
COPS9Q8WXC6 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC11.1□□□□□ -0.63
COPS9Q8WXC6 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
COPS9Q8WXC6 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC11.1□□□□□ -0.63
COPS9Q8WXC6 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC11.1□□□□□ -0.63
COPS9Q8WXC6 AP001412.1-201ENST00000608405 714 ntBASIC11.1□□□□□ -0.63
COPS9Q8WXC6 AC004263.2-201ENST00000617183 678 ntBASIC11.1□□□□□ -0.63
COPS9Q8WXC6 HADH-212ENST00000638621 741 ntTSL 5 BASIC11.1□□□□□ -0.63
COPS9Q8WXC6 SAMD4A-201ENST00000251091 6565 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
COPS9Q8WXC6 GALNT16-201ENST00000337827 5708 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms