Protein–RNA interactions for Protein: Q8TDI8

TMC1, Transmembrane channel-like protein 1, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1Q8TDI8 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
TMC1Q8TDI8 CROCCP1-201ENST00000426910 5675 ntBASIC22.77■■□□□ 1.24
TMC1Q8TDI8 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
TMC1Q8TDI8 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
TMC1Q8TDI8 AL031731.1-201ENST00000642131 2094 ntBASIC22.77■■□□□ 1.23
TMC1Q8TDI8 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
TMC1Q8TDI8 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC22.76■■□□□ 1.23
TMC1Q8TDI8 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
TMC1Q8TDI8 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC22.76■■□□□ 1.23
TMC1Q8TDI8 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC22.76■■□□□ 1.23
TMC1Q8TDI8 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC22.76■■□□□ 1.23
TMC1Q8TDI8 HLA-H-201ENST00000383620 1096 ntBASIC22.76■■□□□ 1.23
TMC1Q8TDI8 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
TMC1Q8TDI8 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC22.76■■□□□ 1.23
TMC1Q8TDI8 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC22.76■■□□□ 1.23
TMC1Q8TDI8 COQ4-205ENST00000609948 956 ntTSL 2 BASIC22.76■■□□□ 1.23
TMC1Q8TDI8 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC22.76■■□□□ 1.23
TMC1Q8TDI8 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
TMC1Q8TDI8 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC22.76■■□□□ 1.23
TMC1Q8TDI8 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
TMC1Q8TDI8 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
TMC1Q8TDI8 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
TMC1Q8TDI8 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC22.76■■□□□ 1.23
TMC1Q8TDI8 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
TMC1Q8TDI8 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC22.76■■□□□ 1.23
TMC1Q8TDI8 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
TMC1Q8TDI8 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC22.75■■□□□ 1.23
TMC1Q8TDI8 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC22.75■■□□□ 1.23
TMC1Q8TDI8 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC22.75■■□□□ 1.23
TMC1Q8TDI8 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC22.75■■□□□ 1.23
TMC1Q8TDI8 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC22.75■■□□□ 1.23
TMC1Q8TDI8 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
TMC1Q8TDI8 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC22.75■■□□□ 1.23
TMC1Q8TDI8 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC22.75■■□□□ 1.23
TMC1Q8TDI8 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC22.75■■□□□ 1.23
TMC1Q8TDI8 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC22.75■■□□□ 1.23
TMC1Q8TDI8 AL035633.1-201ENST00000406139 838 ntBASIC22.75■■□□□ 1.23
TMC1Q8TDI8 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
TMC1Q8TDI8 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC22.75■■□□□ 1.23
TMC1Q8TDI8 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC22.75■■□□□ 1.23
TMC1Q8TDI8 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC22.75■■□□□ 1.23
TMC1Q8TDI8 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC22.75■■□□□ 1.23
TMC1Q8TDI8 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC22.75■■□□□ 1.23
TMC1Q8TDI8 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
TMC1Q8TDI8 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC22.75■■□□□ 1.23
TMC1Q8TDI8 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC22.75■■□□□ 1.23
TMC1Q8TDI8 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC22.75■■□□□ 1.23
TMC1Q8TDI8 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC22.75■■□□□ 1.23
TMC1Q8TDI8 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
TMC1Q8TDI8 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
TMC1Q8TDI8 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC22.75■■□□□ 1.23
TMC1Q8TDI8 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC22.74■■□□□ 1.23
TMC1Q8TDI8 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC22.74■■□□□ 1.23
TMC1Q8TDI8 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC22.74■■□□□ 1.23
TMC1Q8TDI8 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC22.74■■□□□ 1.23
TMC1Q8TDI8 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC22.74■■□□□ 1.23
TMC1Q8TDI8 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC22.74■■□□□ 1.23
TMC1Q8TDI8 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
TMC1Q8TDI8 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC22.74■■□□□ 1.23
TMC1Q8TDI8 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC22.74■■□□□ 1.23
TMC1Q8TDI8 AL512638.1-201ENST00000457493 794 ntBASIC22.74■■□□□ 1.23
TMC1Q8TDI8 AC098859.1-201ENST00000502915 1238 ntBASIC22.74■■□□□ 1.23
TMC1Q8TDI8 AC027369.6-201ENST00000525520 931 ntBASIC22.74■■□□□ 1.23
TMC1Q8TDI8 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC22.74■■□□□ 1.23
TMC1Q8TDI8 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC22.74■■□□□ 1.23
TMC1Q8TDI8 AC138761.1-201ENST00000584393 385 ntBASIC22.74■■□□□ 1.23
TMC1Q8TDI8 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC22.74■■□□□ 1.23
TMC1Q8TDI8 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC22.74■■□□□ 1.23
TMC1Q8TDI8 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
TMC1Q8TDI8 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
TMC1Q8TDI8 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
TMC1Q8TDI8 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC22.73■■□□□ 1.23
TMC1Q8TDI8 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
TMC1Q8TDI8 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
TMC1Q8TDI8 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC22.73■■□□□ 1.23
TMC1Q8TDI8 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC22.73■■□□□ 1.23
TMC1Q8TDI8 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
TMC1Q8TDI8 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
TMC1Q8TDI8 AC006538.1-201ENST00000567905 1585 ntBASIC22.73■■□□□ 1.23
TMC1Q8TDI8 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC22.73■■□□□ 1.23
TMC1Q8TDI8 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC22.73■■□□□ 1.23
TMC1Q8TDI8 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC22.73■■□□□ 1.23
TMC1Q8TDI8 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC22.73■■□□□ 1.23
TMC1Q8TDI8 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
TMC1Q8TDI8 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
TMC1Q8TDI8 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
TMC1Q8TDI8 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
TMC1Q8TDI8 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC22.73■■□□□ 1.23
TMC1Q8TDI8 TSPY16P-201ENST00000449843 468 ntBASIC22.73■■□□□ 1.23
TMC1Q8TDI8 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
TMC1Q8TDI8 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
TMC1Q8TDI8 RNA5SP410-201ENST00000516285 106 ntBASIC22.73■■□□□ 1.23
TMC1Q8TDI8 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC22.73■■□□□ 1.23
TMC1Q8TDI8 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
TMC1Q8TDI8 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC22.73■■□□□ 1.23
TMC1Q8TDI8 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC22.73■■□□□ 1.23
TMC1Q8TDI8 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC22.73■■□□□ 1.23
TMC1Q8TDI8 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC22.73■■□□□ 1.23
TMC1Q8TDI8 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC22.73■■□□□ 1.23
TMC1Q8TDI8 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms